Gene Bcen2424_1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1958 
Symbol 
ID4448264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp2177068 
End bp2178261 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content64% 
IMG OID639694005 
Producthypothetical protein 
Protein accessionYP_835602 
Protein GI116689979 
COG category[S] Function unknown 
COG ID[COG3748] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGGCT TCATCACCGA CTGGCTGAAC CTCGCGCTGC GATGGCTGCA CGTCATCGTC 
GCCATTGCGT GGATCGGCGA GTCGTTCTAT TTCGTCGCGC TCGACAACAG CCTGAAACCG
CCGACCGACC CGAACCAGCG CAAGCGCGGG GTGTTCGGCG AGCTGTGGCA CGTCCACGGC
GGCGGTTTCT ACAACATGCA GAAGTACACG GTCGCCCCGC CGGAAATGCC CGATGACCTG
CACTGGTCGA AGTGGCCGTC GTACACGACG TGGCTGTCGG GCTTCACGCT GTTCTTCGTG
CTGTACCTGC TTGCCCCGAA TACGTACCTG ATCGACAAGA ACGTGCTCGA CATGGGCCCG
GTCGTCGCCG TCGCGTCCGC GCTCGGCTTC CTCGCGGCCG GCTGGATCGT CTACGACTCG
CTGTGCCGCA TTCTCGGCAC CAACGATCGC GTGCTCGGCA TCTGCGTCGG CCTCTACGTC
GTCGTCGCGG CATACCTCGC GTGCCACATC TTCTCGGGCC GTGCTGCCTA CCTGATCGTC
GGCGCGATGC TCGCGACGAT CATGTCGGCG AACGTGTTCT TCGTGATCAT CCCGGGCCAG
CGCAAGATGG TCGACAAGAT GCTCAAGGGC GAGGAACCGA ACCCGATCTA CGGCAAGCGC
GGCAAGCAGC GCTCGGTGCA CAACACGTAC TTCACGCTGC CGGTCGTGTT CGCGATGCTG
TCGAACCACT ATGCGATGAC GTACACGAAC AAGTTCAACT GGGTCGTGCT CGTGCTGATC
ATGCTGGCCG GCGCGCTGAT TCGCCAGTTC TTCGTGATGC GTCACCGCGG CAAGCAGCTG
TGGTACCTGC CGATCGGCGG CGTCGCGCTG CTGTCGGGCG CGCTGGTGTG GACGATGCCG
AAGCCGGTCG CCCCGGAAGC GCAAGCGGCC AACGCACCGA AGATCGTGAT CAACGACATC
ATGCCGATCC TGCAGCAGCG CTGCGTCGAG TGCCACTCGG CCAAGCCGAC GCTGATGGGC
AGCGCGCCCG CGGGCGTGAT GTTCGACACG CCGGACGAAG TGTCGAAGAA CGCGCAGCGC
ATCTACGATC AGGCCGTGCG CCTGAAGGCG ATGCCGATCG GCAACGTCAC GCACATGACC
GACGACGAGC GGACGAAACT CGCCGCCTGG TTCGAGGGCG GCGCGGTCAA GTAA
 
Protein sequence
MEGFITDWLN LALRWLHVIV AIAWIGESFY FVALDNSLKP PTDPNQRKRG VFGELWHVHG 
GGFYNMQKYT VAPPEMPDDL HWSKWPSYTT WLSGFTLFFV LYLLAPNTYL IDKNVLDMGP
VVAVASALGF LAAGWIVYDS LCRILGTNDR VLGICVGLYV VVAAYLACHI FSGRAAYLIV
GAMLATIMSA NVFFVIIPGQ RKMVDKMLKG EEPNPIYGKR GKQRSVHNTY FTLPVVFAML
SNHYAMTYTN KFNWVVLVLI MLAGALIRQF FVMRHRGKQL WYLPIGGVAL LSGALVWTMP
KPVAPEAQAA NAPKIVINDI MPILQQRCVE CHSAKPTLMG SAPAGVMFDT PDEVSKNAQR
IYDQAVRLKA MPIGNVTHMT DDERTKLAAW FEGGAVK