Gene Bcen2424_1949 details

Gene Information

• Locus tag: Bcen2424_1949
• ID: 4450467
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia HI2424
• Kingdom: Bacteria
• Replicon accession: NC_008542
• Strand: +
• Start bp: 2168724
• End bp: 2169404
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 639693996
• Product: phage shock protein A, PspA
• Protein accession: YP_835593
• Protein GI: 116689970
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCTTT TCGACTCTAT TTCGCGCACG ATCAAAGGCC TGCTGAACGA TGCGGCCGAT 
TCGGTACAGG ATCCGTCGCG CGACGCACGG CAGATCGTGC GGGAGCTCGA CGACAGCATC 
GGCCGTGCCG AGAATTCGCT GATCGAAATC GAGGCACAGG TCGCGACCCA GCGCAGCAAG 
CGCGATGCGG CCGACGACAA GGTCAGGAAG TACGAGGACG GCGCGAAGCG CGCGCTGCAG 
GGCGGCGACG AAGCGCTCGC CCGCGAGGCG CTCGCGGCCC AGTCGAACGC GGAAGCCGAG 
CGCGACGCGC TCGCGGCCGA GCTGACGACG CTCGAGCCGT CGGTCGAGAA ACTGAAGGGG 
CAGATCGCCG ACATGCGCCA GCGCCGCAAC GATCTGAACG CACGCTCGAA CATCCTGCAG 
GCGAAGCAGG AAATCGCGCA GGCGAAGGAC GTCGCAGCCA GCGCGCTGGG CGGCATCGGC 
GGCAAGAACC TGTCCGAGGA TTTCCAGAAG CTCGAGGACA AGGTCGCGCT GCAGAACGCA 
CGCTCGGACG CACGCCTCAA TTCGGCCGAC ACGTCGAGCG GCAAGGCGCT CGACGACAAG 
CTCGCCGCGC TGAACAAGGG CCCGTCGGTG GAAGATCGCC TCGCCGCACT GAAGAAGCAG 
CTCGATACGC CCGCGCAGTA A 

 

Protein sequence

MSLFDSISRT IKGLLNDAAD SVQDPSRDAR QIVRELDDSI GRAENSLIEI EAQVATQRSK 
RDAADDKVRK YEDGAKRALQ GGDEALAREA LAAQSNAEAE RDALAAELTT LEPSVEKLKG 
QIADMRQRRN DLNARSNILQ AKQEIAQAKD VAASALGGIG GKNLSEDFQK LEDKVALQNA 
RSDARLNSAD TSSGKALDDK LAALNKGPSV EDRLAALKKQ LDTPAQ