| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1929 |
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| Symbol | |
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| ID | 4450446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 2145331 |
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| End bp | 2146377 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639693975 |
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| Product | porin |
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| Protein accession | YP_835573 |
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| Protein GI | 116689950 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.202601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGACAC CCCGCTTCAT CCGCACGGCC GCGGCCGCCG CGACGCTGGC CGCATGCGGC
GCCGCCGCGC ACGCGCAGTC CGCCCTCACG CTGTACGGCG CGCTCGACGC CGGCGTGCAA
TACCTGACGC ACGCCGACGG GCATCGTTCG ACCGTGCGGT TGCAGAACTA CGGCATCCTG
CCTTCACAGG TCGGGATCAA GGGTCACGAG GATCTCGGCG GCAGCTGGCG CGCGCTGTTC
AAGCTCGAAC AGGGCCTCAA CCTCAACGAC GGCACCGCGA CCGTGCCCGG CTACGCGTTC
TTCCGCGGCG CATACGTCGG CATCGCGGGG CCGGTCGGCA CCGTCACGCT CGGCCGCCAG
TTCAGCGTGC TGTTCGACAA GACGCTGTTC TACGACCCGC TCTGGTACGG GTCGTACAGC
GGCCAGGGCG TGCTCGTGCC GATGAACGCG AACTTCATCG ACCATTCGGT CAAATACCAG
TCGCCGACGT TCGCCGGCTT CGACGTCGAG GCGCTCGCCG CGACTGCCGG CGTCGCCGGC
AATACGCGCG CCGGACGCGT GCTCGAGCTC GGCGGCCAGT ACACGAGCAA CGGCCTATCG
GTCGGCGCGG TGCTGCACCA GGCGCACGGC GACGTATCGG CGGCCGACGA TGTGTCCGCG
CGGCGTCGCG AACTCGGCAC GCTCGCCGCG CGCTATGCGT TCGCCACGCT GCCGCTCACC
GTCTATGCAG GCGTCGAGCG CCTGACCGGC GACCTCGACG CGGCCCGCAC GATCGTCTGG
GGCGGCGCGC GCTACCTGAC GTCGAACGGA ATCGGCCTGA ACGCGGGCGT CTACCACACC
GATTCGCACA CGCCGGCGAT CGGCCATCCG ACGCTGTTCA TCGCAAGCAC CACGTATGCA
CTGTCGAAAC GCACCGTCGC CTACGTGAAC CTCGGCTATG CGCGCAACAG CGGCCAGAGT
TCGCAGACCG TCTACGAATA CGACCCCACG CCGCTCGCCG GCGCGTCGCA GTTCGGCGCG
ATGGTCGGCA TGTACCACCT GTTCTGA
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| Protein sequence | MTTPRFIRTA AAAATLAACG AAAHAQSALT LYGALDAGVQ YLTHADGHRS TVRLQNYGIL
PSQVGIKGHE DLGGSWRALF KLEQGLNLND GTATVPGYAF FRGAYVGIAG PVGTVTLGRQ
FSVLFDKTLF YDPLWYGSYS GQGVLVPMNA NFIDHSVKYQ SPTFAGFDVE ALAATAGVAG
NTRAGRVLEL GGQYTSNGLS VGAVLHQAHG DVSAADDVSA RRRELGTLAA RYAFATLPLT
VYAGVERLTG DLDAARTIVW GGARYLTSNG IGLNAGVYHT DSHTPAIGHP TLFIASTTYA
LSKRTVAYVN LGYARNSGQS SQTVYEYDPT PLAGASQFGA MVGMYHLF
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