Gene Bcen2424_1880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1880 
Symbol 
ID4448101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp2085691 
End bp2086584 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content67% 
IMG OID639693924 
Product2-hydroxy-3-oxopropionate reductase 
Protein accessionYP_835524 
Protein GI116689901 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID[TIGR01505] 2-hydroxy-3-oxopropionate reductase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.109553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACCA TCGGTTTCAT CGGCCTCGGC ATCATGGGCG CGCACATGGC GCGCAACCTG 
CTCAAGGGCG ATCATCAACT CGTCGTGAAC GGCGCGTTCC CGATTCCGGA CGACCTGCGC
GGGAACGCGA AGGTCGTCGC GAACTCGACC GAAGTCGCGC AGCACGCGGA CATCATCATC
TCGATGGTGC CGGACACGCC GGACGTGCGT AACGTGCTGT TCGCCGACGA CGGCGTCGCG
AAAGGCCTGA CGGCCGGCAA GCTCGTGATC GACATGAGCT CGATCTCGCC GCTCGACACG
CAGGCGTTCG CGAAGCAGAT CAACGCGCTC GGCTGCGACT ACCTCGACGC GCCGGTGTCC
GGCGGCGAAG TCGGCGCCCG CGAAGCGACG CTGACGATCA TGGTCGGCGG CCCGGAGAAG
GCGTTCGAAC GCGCGAAGCC GCTGTTCGAG AAGATGGGCA AGAACATCAC GCTCGTCGGC
GACAACGGCG CGGGCCAGAC CTGCAAGGTC GCGAACCAGA TCATCGTCGC GCTGAACATC
GAGGCGGTCG GCGAAGCGCT GCTGTTCGCC GCCCGCTCGG GCGCCGATCC GGAGCGCGTG
CGCCAGGCGC TGATGGGCGG CTTCGCAGCG TCGCGCATCC TCGAAGTACA CGGTGCGCGG
ATGACCAAGC GCACGTTCGA TCCGGGCTTC CGCATCGAGC TGCACCAGAA GGACCTGAAC
CTCGCGCTCG ACGGCGCACG CAAGCTCGGC CTCGCGCTGC CGCACACCGC GAGCGCGCAG
CAGCTGTTCA GCGTGTGCGC ATCGCACGGC GGCAAGGCAT GGGATCACTC GGCACTCGTG
CGCGCGCTCG AGATCATGTC GAACTTCGAG ATCGGCCAGA CGCCGGCCGC GTAA
 
Protein sequence
MATIGFIGLG IMGAHMARNL LKGDHQLVVN GAFPIPDDLR GNAKVVANST EVAQHADIII 
SMVPDTPDVR NVLFADDGVA KGLTAGKLVI DMSSISPLDT QAFAKQINAL GCDYLDAPVS
GGEVGAREAT LTIMVGGPEK AFERAKPLFE KMGKNITLVG DNGAGQTCKV ANQIIVALNI
EAVGEALLFA ARSGADPERV RQALMGGFAA SRILEVHGAR MTKRTFDPGF RIELHQKDLN
LALDGARKLG LALPHTASAQ QLFSVCASHG GKAWDHSALV RALEIMSNFE IGQTPAA