| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1878 |
|---|
| Symbol | |
|---|
| ID | 4448099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 2082994 |
|---|
| End bp | 2084769 |
|---|
| Gene Length | 1776 bp |
|---|
| Protein Length | 591 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639693922 |
|---|
| Product | glyoxylate carboligase |
|---|
| Protein accession | YP_835522 |
|---|
| Protein GI | 116689899 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3960] Glyoxylate carboligase |
|---|
| TIGRFAM ID | [TIGR01504] glyoxylate carboligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.232165 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGA TGAGAGCCGT CGACGCAGCC GTACTCGTGC TCGAGAAGGA AGGCATCCAG
ACCGCGTTCG GCGTGCCGGG CGCCGCGATC AATCCGTTCT ACTCGGCCAT GCGCAAGTCG
GGCGGCATCA GCCACGTGCT GGCGCGCCAC GTCGAAGGTG CATCGCACAT GGCCGAAGGC
TTCACGCGTG CCGCCCCCGG CAACATCGGC GTTTGCATCG GCACGTCGGG CCCCGCCGGC
ACCGACATGA TCACCGGCCT CTATTCCGCG TCCGCCGACT CGATTCCGAT CCTCGCGATC
ACCGGCCAGG CACCGCGCGC GCGTCTCTAC AAGGAAGACT TCCAGGCCGT CGACATCGAA
TCGATCGCGA AGCCGGTCAC GAAGTGGGCC GTCACCGTGC GCGAACCGGC GCTCGTGCCG
CGCGTGTTCC AGCAGGCGTT CCACCTGATG CGCTCGGGCC GCCCGGGCCC CGTGCTGGTC
GACCTGCCGA TCGACGTGCA GCTCGCCGAA ATCGAATTCG ACATCGACAC GTACGAACCG
CTGCCGGTCT ACAAGCCCGC GGCCACCCGC GCGCAGATCG AGAAGGCGCT CGCGATGCTC
AACGACGCGG ACAAGCCGCT GATCGTGTCG GGCGGCGGCG TGCTCAACGC GGCGGCCGAA
GACCTGCTCG TGCAGTTCGC CGAAACGGTC GGCGTGCCGG TGATCCCGAC GCTGATGTCG
TGGGGCGCGA TTGCCGACGA CCACCCGCTG ATGGCCGGCA TGGTCGGCTT GCAGACGTCG
CACCGCTACG GCAACGCGAC GCTGCTCGCA TCCGACTTCG TGCTCGGCAT CGGCAACCGC
TGGGCGAACC GCCACACGGG CAGCGTCGAG GTCTATACGA AGGGCCGCAA GTTCGTGCAC
GTCGATATCG AGCCGACGCA GATCGGCCGC GTGTTCGGCC CGGACCTCGG CATCGTGTCC
GACGCGAAGG CGGCACTCGA ACTGTTCGTC GCGGTCGCGC GGGAATGGAA GGCCGCCGGC
AAGCTCAAGG ACCGCAGCGC GTGGGTCGCC GACTGCCAGG CGCGCAAGCG CACGCTGCAG
CGCAAGACGC ACTTCGACAA CGTGCCGGTC AAGCCGCAGC GCGTGTACGA AGAGATGAAC
AAGGTGTTCG GCCGCGATAC CTGCTACGTC AGCACGATCG GCCTGTCGCA GATCGCCGCC
GCGCAGTTCC TGCACGTGTT CAAGGCACGC AACTGGATCA ACTGCGGCCA GGCCGGCCCG
CTCGGCTGGA CGATCCCCGC GGCGCTCGGC GTGCGTGCAG CCGACCCGAG CCGCCCGATC
GTCGCGCTGT CCGGCGACTA CGACTTCCAG TTCATGATCG AGGAGCTGGC GGCCGGCGCG
CAATTCAAGC TGCCGTACGT GCACGTCGTC GTGAACAACT CGTACCTCGG GCTGATCCGC
CAGGCGCAGC GCGCGTTCGA CATGGACTAC TGCGTGCAGC TCGCGTTCGA CAACGTGAAC
GCGCCGGAAC TGAACGGTTA CGGCGTCGAC CACGTGGCCG TCGCGGAAGG CCTCGGCTGC
AAGGCGCTGC GCGTGTTCAA GCCGGAAGAG ATCGAGCCGG CGCTGCGCCA GGCGCAAACG
CTCGCGGAAG AATTCAGCGT GCCGGTGGTC GTCGAAGTGA TCCTCGAGCG CGTGACGAAC
ATCTCGATGG GCACCGAAAT CGACGCGATC AACGAGTTCG AGGATCTCGC CGAAAAGGCC
GAGCACGCCC CGACCGCGAT CTCGATGCTC GACTGA
|
|---|
| Protein sequence | MAKMRAVDAA VLVLEKEGIQ TAFGVPGAAI NPFYSAMRKS GGISHVLARH VEGASHMAEG
FTRAAPGNIG VCIGTSGPAG TDMITGLYSA SADSIPILAI TGQAPRARLY KEDFQAVDIE
SIAKPVTKWA VTVREPALVP RVFQQAFHLM RSGRPGPVLV DLPIDVQLAE IEFDIDTYEP
LPVYKPAATR AQIEKALAML NDADKPLIVS GGGVLNAAAE DLLVQFAETV GVPVIPTLMS
WGAIADDHPL MAGMVGLQTS HRYGNATLLA SDFVLGIGNR WANRHTGSVE VYTKGRKFVH
VDIEPTQIGR VFGPDLGIVS DAKAALELFV AVAREWKAAG KLKDRSAWVA DCQARKRTLQ
RKTHFDNVPV KPQRVYEEMN KVFGRDTCYV STIGLSQIAA AQFLHVFKAR NWINCGQAGP
LGWTIPAALG VRAADPSRPI VALSGDYDFQ FMIEELAAGA QFKLPYVHVV VNNSYLGLIR
QAQRAFDMDY CVQLAFDNVN APELNGYGVD HVAVAEGLGC KALRVFKPEE IEPALRQAQT
LAEEFSVPVV VEVILERVTN ISMGTEIDAI NEFEDLAEKA EHAPTAISML D
|
|---|
| |