Gene Bcen2424_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1876 
Symbol 
ID4448097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp2081107 
End bp2081742 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content73% 
IMG OID639693920 
ProductRNA polymerase sigma factor 
Protein accessionYP_835520 
Protein GI116689897 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGCAAG CCGGACAGGC GGTCGATGAA CGGGCGGCGG ACGATGCGCT CGCGCGCGGC 
GAGCGGTTTC GCGCGCTCGT GCTGCCGCAT CTCGACGCCG CCTACAACCT CGCGCGCTGG
CTGAGCGGCA GCGCCGGCGA TGCGGACGAC GTCGTCCAGG ACGCGTGCAT GCGAGCGCTG
CGCTTCGTCG ATTCGTGTCG CGGCGACAAC GCGCGGCCGT GGCTGCTGAC GATCGTGCGC
CACACCTGGT ACACCGAATG GCGGCGGCGC ACGCATGCGC ACGAGGTCGC GCTGCCCGAC
ACGCTCGACG ATGCCGACGT CCCGGACGAC TGGCAGCCGG CGACGGAGGA CCCGCTCGCG
CACCTGCTTC GCGGCGAGAA CGTGCGGCTC GTGAATGCGG CGCTCGCGAA GCTGCCGCCC
GAATACCGCG AGGTGCTCGT GCTGCGCGAG ATGGAGGACC TGAGCTACCG CGAGATCGCG
GCGATCGCGG ACGTGCCGGT CGGCACGGTG ATGTCGCGGC TCGCGCGCGG CCGGCGCAAG
CTTGCCGCGC TGCTGGGCGG CGTGCCGGCG ACCGAAGGCC GGCCGGGCCG AGCGCCGGCG
GGCGGAACCG CATCGGAGGC TATCGATGGA CTGTAA
 
Protein sequence
MGQAGQAVDE RAADDALARG ERFRALVLPH LDAAYNLARW LSGSAGDADD VVQDACMRAL 
RFVDSCRGDN ARPWLLTIVR HTWYTEWRRR THAHEVALPD TLDDADVPDD WQPATEDPLA
HLLRGENVRL VNAALAKLPP EYREVLVLRE MEDLSYREIA AIADVPVGTV MSRLARGRRK
LAALLGGVPA TEGRPGRAPA GGTASEAIDG L