Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1876 |
Symbol | |
ID | 4448097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 2081107 |
End bp | 2081742 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639693920 |
Product | RNA polymerase sigma factor |
Protein accession | YP_835520 |
Protein GI | 116689897 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGGCAAG CCGGACAGGC GGTCGATGAA CGGGCGGCGG ACGATGCGCT CGCGCGCGGC GAGCGGTTTC GCGCGCTCGT GCTGCCGCAT CTCGACGCCG CCTACAACCT CGCGCGCTGG CTGAGCGGCA GCGCCGGCGA TGCGGACGAC GTCGTCCAGG ACGCGTGCAT GCGAGCGCTG CGCTTCGTCG ATTCGTGTCG CGGCGACAAC GCGCGGCCGT GGCTGCTGAC GATCGTGCGC CACACCTGGT ACACCGAATG GCGGCGGCGC ACGCATGCGC ACGAGGTCGC GCTGCCCGAC ACGCTCGACG ATGCCGACGT CCCGGACGAC TGGCAGCCGG CGACGGAGGA CCCGCTCGCG CACCTGCTTC GCGGCGAGAA CGTGCGGCTC GTGAATGCGG CGCTCGCGAA GCTGCCGCCC GAATACCGCG AGGTGCTCGT GCTGCGCGAG ATGGAGGACC TGAGCTACCG CGAGATCGCG GCGATCGCGG ACGTGCCGGT CGGCACGGTG ATGTCGCGGC TCGCGCGCGG CCGGCGCAAG CTTGCCGCGC TGCTGGGCGG CGTGCCGGCG ACCGAAGGCC GGCCGGGCCG AGCGCCGGCG GGCGGAACCG CATCGGAGGC TATCGATGGA CTGTAA
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Protein sequence | MGQAGQAVDE RAADDALARG ERFRALVLPH LDAAYNLARW LSGSAGDADD VVQDACMRAL RFVDSCRGDN ARPWLLTIVR HTWYTEWRRR THAHEVALPD TLDDADVPDD WQPATEDPLA HLLRGENVRL VNAALAKLPP EYREVLVLRE MEDLSYREIA AIADVPVGTV MSRLARGRRK LAALLGGVPA TEGRPGRAPA GGTASEAIDG L
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