Gene Bcen2424_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1875 
Symbol 
ID4448096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp2080218 
End bp2081117 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content75% 
IMG OID639693919 
Productputative transmembrane anti-sigma factor 
Protein accessionYP_835519 
Protein GI116689896 
COG category[K] Transcription 
COG ID[COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTGTA ACGAAGCGCG AGCGTTGCTG GACGCGGACG TCGACCGCGA GCTGTCGGCG 
CCCGATGCGT TGCGGGTCCA GCAGCATGTC GAAGGGTGCG ACGCGTGCCG CCGCGAACGC
GCGCGGATCG TCACGCTGGT GCAGGCCGTG CGGCAGGCCG ATTATCACCG CGCGCCGGAC
GCGCTGCGGG CGAGCATCCT CGCGAGCCTG CCGGCAGCGG CCGACGCGCC TGCTCACGAG
CCGTCGCGGG CTGAGCCGCG GCCTGAGTCC CGGCCTGAGC CGCGGCGGCC GCGCGGCCGC
GACTGGTTTT CCTGGCTGAC CGGGCGCGGC GGGTCGGCCC GACCGGGGCC GGCCGGCACC
GGCACCAGGC CGCGCGTGGC CGCGTTGCCG GGGCTCGGCT GGGGTGTCGC GTTGCTGATG
GCGGTCGCGG CGGCCGGCGG AATGGCATGG TCGGCCCGCC ACGCCGACAC CGACCGAACG
GTCGACGAAC TGGTCGCGAG CCACGTGCGG GCCGACCTGT CGGCGCGCGA CATCGACGTG
ATCTCGACCG ACCAGCACAC GGTCAAGCCG TGGTTCAACG GCCGGCTCGA CTATGCGCCG
CCGGTCGAGG ATCTCGCCAG GAGCGGCTTC GCGCTGGTCG GCGGCCGGCT CGACTATGTC
GGGCGACGCC GCGTCGCGGT GCTCGTCTAC CGCCACCGGC AACACGTGGT CGACGTCTAC
GTACAGCCGG CCGGAGAGCG GCCGGCGGCC CCGTACACGA CCGTGTCGCA GGGCTATGCG
CTCGACCGCT GGAACGCGGC CGGGATGACG TGGTGGGCCG TGACCGACGC CGAGCCGGCG
GCGCTCGCGG CGTTCCGGAC GGCGCTCGAC GCGCGGCTCG CCGGCACGCC CAGCGAATGA
 
Protein sequence
MDCNEARALL DADVDRELSA PDALRVQQHV EGCDACRRER ARIVTLVQAV RQADYHRAPD 
ALRASILASL PAAADAPAHE PSRAEPRPES RPEPRRPRGR DWFSWLTGRG GSARPGPAGT
GTRPRVAALP GLGWGVALLM AVAAAGGMAW SARHADTDRT VDELVASHVR ADLSARDIDV
ISTDQHTVKP WFNGRLDYAP PVEDLARSGF ALVGGRLDYV GRRRVAVLVY RHRQHVVDVY
VQPAGERPAA PYTTVSQGYA LDRWNAAGMT WWAVTDAEPA ALAAFRTALD ARLAGTPSE