Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1875 |
Symbol | |
ID | 4448096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 2080218 |
End bp | 2081117 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639693919 |
Product | putative transmembrane anti-sigma factor |
Protein accession | YP_835519 |
Protein GI | 116689896 |
COG category | [K] Transcription |
COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACTGTA ACGAAGCGCG AGCGTTGCTG GACGCGGACG TCGACCGCGA GCTGTCGGCG CCCGATGCGT TGCGGGTCCA GCAGCATGTC GAAGGGTGCG ACGCGTGCCG CCGCGAACGC GCGCGGATCG TCACGCTGGT GCAGGCCGTG CGGCAGGCCG ATTATCACCG CGCGCCGGAC GCGCTGCGGG CGAGCATCCT CGCGAGCCTG CCGGCAGCGG CCGACGCGCC TGCTCACGAG CCGTCGCGGG CTGAGCCGCG GCCTGAGTCC CGGCCTGAGC CGCGGCGGCC GCGCGGCCGC GACTGGTTTT CCTGGCTGAC CGGGCGCGGC GGGTCGGCCC GACCGGGGCC GGCCGGCACC GGCACCAGGC CGCGCGTGGC CGCGTTGCCG GGGCTCGGCT GGGGTGTCGC GTTGCTGATG GCGGTCGCGG CGGCCGGCGG AATGGCATGG TCGGCCCGCC ACGCCGACAC CGACCGAACG GTCGACGAAC TGGTCGCGAG CCACGTGCGG GCCGACCTGT CGGCGCGCGA CATCGACGTG ATCTCGACCG ACCAGCACAC GGTCAAGCCG TGGTTCAACG GCCGGCTCGA CTATGCGCCG CCGGTCGAGG ATCTCGCCAG GAGCGGCTTC GCGCTGGTCG GCGGCCGGCT CGACTATGTC GGGCGACGCC GCGTCGCGGT GCTCGTCTAC CGCCACCGGC AACACGTGGT CGACGTCTAC GTACAGCCGG CCGGAGAGCG GCCGGCGGCC CCGTACACGA CCGTGTCGCA GGGCTATGCG CTCGACCGCT GGAACGCGGC CGGGATGACG TGGTGGGCCG TGACCGACGC CGAGCCGGCG GCGCTCGCGG CGTTCCGGAC GGCGCTCGAC GCGCGGCTCG CCGGCACGCC CAGCGAATGA
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Protein sequence | MDCNEARALL DADVDRELSA PDALRVQQHV EGCDACRRER ARIVTLVQAV RQADYHRAPD ALRASILASL PAAADAPAHE PSRAEPRPES RPEPRRPRGR DWFSWLTGRG GSARPGPAGT GTRPRVAALP GLGWGVALLM AVAAAGGMAW SARHADTDRT VDELVASHVR ADLSARDIDV ISTDQHTVKP WFNGRLDYAP PVEDLARSGF ALVGGRLDYV GRRRVAVLVY RHRQHVVDVY VQPAGERPAA PYTTVSQGYA LDRWNAAGMT WWAVTDAEPA ALAAFRTALD ARLAGTPSE
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