| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1862 |
|---|
| Symbol | |
|---|
| ID | 4447943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 2067606 |
|---|
| End bp | 2068661 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639693906 |
|---|
| Product | NAD-dependent epimerase/dehydratase family protein |
|---|
| Protein accession | YP_835506 |
|---|
| Protein GI | 116689883 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAA AAAAAGTCCT GATCCTGGGT GTGAACGGCT TCATCGGCCA TCACCTGTCG
AAACGCATTC TTGAAACCAC CGATTGGGAA GTGTTCGGCA TGGACATGCA GACCGACCGG
CTGGGCGACC TCGTCAACCA CGAGCGGATG CATTTCTTCG AAGGCGACAT CACGATCAAC
AAGGAGTGGG TCGAGTATCA CGTGAAGAAG TGCGACGTGA TCCTGCCGCT CGTCGCGATC
GCTACGCCGG CCACCTACGT CCAGCAGCCG CTGCGCGTGT TCGAGCTCGA CTTCGAGGCA
AACCTGCCGA TCGTGCGCTC GGCCGTCAAG TACGGCAAGC ACCTGGTGTT CCCGTCGACC
TCCGAGGTCT ACGGCATGTG CTCGGACGAG CAGTTCGACC CGGACGCGTC GGCGCTCACC
TACGGCCCGA TCAACAAGCC GCGCTGGATC TACGCGTGCT CGAAGCAGCT GATGGACCGC
GTGATCTGGG GTTACGGGAT GGAAGGCCTG AACTTCACGC TGTTCCGTCC GTTCAACTGG
ATCGGCCCGG GCCTCGACTC GATCTACACG CCGAAGGAAG GCAGCTCGCG CGTGGTCACG
CAGTTCCTCG GCCACATCGT GCGCGGCGAG AACATCAGCC TCGTCGACGG CGGTTCGCAG
AAGCGCGCGT TCACCGATAT CGGCGACGGC ATCAGCGCGC TGATGAAGAT CATCGAGAAC
AAGGGCGGCG TCGCGTCGGG CAAGATCTAC AACATCGGGA ATCCGAAGAA CAACTTCTCG
GTTCGCGAGC TTGCGCACAA GATGCTCGAA CTGGCCGCAG AATTCCCCGA GTACGCCGAT
TCGGCCAAGC AGGTGAAGCT CGTCGAAACG ACGTCCGGCG CCTACTACGG CAACGGCTAC
CAGGACGTGC AGAACCGCGT GCCGAAGATC GACAATACGA TGCAGGAGCT CGGCTGGGCG
CCGCAGGCGA CGTTCGACGA CGCGCTGCGC AACATCTTCG AAGCGTATCG CGGCCACGTC
GCCGACGCGC GCGCGCTCGT CGAACAGCAA GGCTGA
|
|---|
| Protein sequence | MKAKKVLILG VNGFIGHHLS KRILETTDWE VFGMDMQTDR LGDLVNHERM HFFEGDITIN
KEWVEYHVKK CDVILPLVAI ATPATYVQQP LRVFELDFEA NLPIVRSAVK YGKHLVFPST
SEVYGMCSDE QFDPDASALT YGPINKPRWI YACSKQLMDR VIWGYGMEGL NFTLFRPFNW
IGPGLDSIYT PKEGSSRVVT QFLGHIVRGE NISLVDGGSQ KRAFTDIGDG ISALMKIIEN
KGGVASGKIY NIGNPKNNFS VRELAHKMLE LAAEFPEYAD SAKQVKLVET TSGAYYGNGY
QDVQNRVPKI DNTMQELGWA PQATFDDALR NIFEAYRGHV ADARALVEQQ G
|
|---|
| |