| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1838 |
|---|
| Symbol | |
|---|
| ID | 4447919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 2042055 |
|---|
| End bp | 2043059 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639693882 |
|---|
| Product | transketolase, central region |
|---|
| Protein accession | YP_835482 |
|---|
| Protein GI | 116689859 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.267827 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGGA AGATCACTTA TTCGCAGGCG ATCAACGAGG CGCTCGCGCA GGAAATGGCG
CGCGACGACA GCGTGATCGT GATGGGCGAG GACAACGCGG GCGGTGCGGG CGCGCCGGGC
GAGGACGACG CATGGGGCGG CGTGCTCGGC GTGACGAAGG GGCTGTTCCA CAAGTTTCCG
GGCCGCGTGC TCGATACGCC GCTGTCGGAG GGCGGCTACA TCGGCGCGGC GGTCGGCGCC
GCCGCGTGCG GGATGCGTCC CGTCGCGGAA CTGATGTTCA TCGATTTCAT GGGCGTGTGT
TTCGACCAGA TCTTCAACCA GGCCGCGAAA TTCCGCTACA TGTTCGGCGG CAAGGCCGTG
ACGCCGGTCG TGATCCGCGC GATGTACGGC GCCGGCCTGC GCGCGGCCGC GCAGCACTCG
CAGATGCTCA CGTCGCTGTT CACGCATATC CCGGGGCTGA AGGTCGTGTG CCCGTCGACG
CCGTACGACG CGAAGGGGCT GCTGATCCAG GCGATCCGCG ACAACGATCC CGTGATCTTC
CTCGAACACA AGCTGCTCTA TACGCGTGAG GGCGACGTCC CGGAGGAATC CTATGCGATT
CCGTTCGGCG AGGCGAACGT GCTGCGCGAC GGCGACGACG CGACGATCGT CACGTACGGC
CGGATGGTGC ATCTCGCGAT GGACGCGGCC GCGACGCTCG CGAAGGGCGG CATCCAGTGC
GACGTGATCG ACCTGCGCAC GACGTCGCCG CTCGACGAGG AAACGATCCT CGAAAGCGCG
GCGCGCACCG GGCGCGTGGT GGTGGTCGAC GAAGCGAATC CGCGCTGCTC GATCGCGACC
GACATCGCCG CGCTCGTCGC GCAGCGCGCG TTCCGGTCTC TGAAGGCGCC GATCGAGCTC
GTCACCGCGC CGCATACGCC CGCGCCGTTC GCCGGCGTGC TGGAAGACCT GTATATCCCG
TCCGCCGATG CAATTGCGCA GGCGGTACTC AAGACGAGGA GCTGA
|
|---|
| Protein sequence | MARKITYSQA INEALAQEMA RDDSVIVMGE DNAGGAGAPG EDDAWGGVLG VTKGLFHKFP
GRVLDTPLSE GGYIGAAVGA AACGMRPVAE LMFIDFMGVC FDQIFNQAAK FRYMFGGKAV
TPVVIRAMYG AGLRAAAQHS QMLTSLFTHI PGLKVVCPST PYDAKGLLIQ AIRDNDPVIF
LEHKLLYTRE GDVPEESYAI PFGEANVLRD GDDATIVTYG RMVHLAMDAA ATLAKGGIQC
DVIDLRTTSP LDEETILESA ARTGRVVVVD EANPRCSIAT DIAALVAQRA FRSLKAPIEL
VTAPHTPAPF AGVLEDLYIP SADAIAQAVL KTRS
|
|---|
| |