Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1829 |
Symbol | rho |
ID | 4447910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 2031883 |
End bp | 2033145 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639693873 |
Product | transcription termination factor Rho |
Protein accession | YP_835473 |
Protein GI | 116689850 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0156095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTTAT CCGAGCTCAA GTCTCTGCAC GTCTCCGAAC TGATCGAAAT GGCCAATGGC CTGGAGATCG AAAACGCGAA CCGCCTGCGC AAGCAGGAGT TGATGTTTGC CATTCTCAAA AAGCGCGCCA AGACGGGAGA GACGATCTTC GGCGACGGTA CGCTCGAAGT GCTGCCGGAC GGCTTCGGCT TCCTGCGCTC GCCGGAAATG TCGTACCTCG CGAGCACCGA CGACATCTAC ATCAGCCCGT CGCAGATCCG CCGCTTCAAC CTGCACACCG GCGACACCAT CGAAGGTGAA GTCCGCACGC CGAAGGACGG CGAGCGCTAC TTCGCGCTGG TGAAGGTCGA CAAAGTCAAC GGGCAGCCGC CCGAGGCCTC GAAACACAAG ATCATGTTCG AGAACCTCAC GCCGCTGCAC CCGAACAAGC CGCTGTCGCT CGAACGCGAA ATGCGCGGCG AGGAAAACGT CACGGGCCGC ATCATCGACA TGATCGCGCC GATCGGCAAG GGCCAGCGCG GCCTGCTCGT CGCGTCTCCG AAGTCGGGCA AGACCGTGAT GCTCCAGCAC ATCGCGCACG CGATCAAGCA GAACCACCCG GACGTGATCC TGTTCGTGCT GCTAATCGAC GAACGCCCGG AAGAAGTGAC CGAAATGCAG CGCTCGGTCG CCGGCGAAGT GATCGCGTCG ACGTTCGACG AACCGGCCAC GCGCCACGTC CAGGTCGCCG AAATGGTGAT CGAGAAGGCC AAGCGCCTCG TCGAAATGAA GCACGACGTC GTGATTCTGC TCGACTCGAT CACGCGTCTC GCGCGTGCGT ACAACACCGT GATCCCGGCG TCGGGCAAGG TGCTGACGGG CGGTGTCGAC GCGAACGCGC TGCAGCGTCC GAAGCGCTTC TTCGGTGCGG CGCGCAACAT CGAGGAAGGC GGCTCGCTGA CGATCATCGG CACCGCGCTG ATCGAAACCG GCAGCCGCAT GGACGACGTG ATCTACGAAG AGTTCAAGGG CACCGGCAAC ATGGAAGTGC ACCTCGAGCG CCGTCTCGCG GAAAAGCGCG TGTACCCGTC GATCAACCTG AACAAGTCGG GCACGCGTCG CGAGGAAATG CTGATCAAAC CCGAGATCCT TCAGAAGATC TGGGTGCTGC GCAAGTTCAT CCACGACATG GACGAGGTCG AGGCGATGGA ATTCCTGCTC GACAAGATCC GCCAGACGAA GAGCAACTCC GAGTTCTTCG ACCTGATGCG CCGCGGCGGC TGA
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Protein sequence | MHLSELKSLH VSELIEMANG LEIENANRLR KQELMFAILK KRAKTGETIF GDGTLEVLPD GFGFLRSPEM SYLASTDDIY ISPSQIRRFN LHTGDTIEGE VRTPKDGERY FALVKVDKVN GQPPEASKHK IMFENLTPLH PNKPLSLERE MRGEENVTGR IIDMIAPIGK GQRGLLVASP KSGKTVMLQH IAHAIKQNHP DVILFVLLID ERPEEVTEMQ RSVAGEVIAS TFDEPATRHV QVAEMVIEKA KRLVEMKHDV VILLDSITRL ARAYNTVIPA SGKVLTGGVD ANALQRPKRF FGAARNIEEG GSLTIIGTAL IETGSRMDDV IYEEFKGTGN MEVHLERRLA EKRVYPSINL NKSGTRREEM LIKPEILQKI WVLRKFIHDM DEVEAMEFLL DKIRQTKSNS EFFDLMRRGG
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