| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1821 |
|---|
| Symbol | |
|---|
| ID | 4450624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 2023271 |
|---|
| End bp | 2024161 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639693865 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_835465 |
|---|
| Protein GI | 116689842 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.361225 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATGT TGCGCGCGAT GCAAAACAAC CGATCCAGGG AACCGCTCAC GTTCGCCCAG
CGCGCGATCT GTGTGGCTGC GTTCTCCACG CTACTGGCCG CCTGTGCGAC GCGGCTCGAC
AACGCGCCCG TCGTCGACCG CTCCGGGTCG CTCGGCACGA CTGCCGCCGC GCAGCCCGCG
GTGCCGCTCG GTCCGCCGCC GCCGGGCTTC TATCGTGTGA AGCCGGGTGA CACGCTGTAC
CGGATTGCGC TCGAGAACGG GCAGAACTAT CGCGACATCG CGACGTGGAA CAATCTGGCG
AACCCGAACC AGATCGAAGT CGACCAGCTG CTGCGCGTGG CGCCGCCGGG CGGCGCTGCA
GTGGCGGGCA CGCCGGCCGC CGCGCCGATC GTCGGTGGTG CGGTCGCGAC CGCGCCGCTG
AGCAGCGGTC CGGCCGCGCC GGCCGCCGGC ACGTCGTCGG CGCTCGCCGC CACGCCCCCG
GCCGCGGCGA CCGGATCGAG CGATACGGCG GCGGCGCCGA GCGGCCCCGT GACGTTCGCG
TGGCCCGCGC GCGGCCCCGT GCTGAACGGG TTCGACGATG CGAAGAACAA GGGTGTCAAT
ATCGGCGGGA CGGCCGGCGA GGCCGTGAAG GCGGCGGCGG ACGGCCGCGT CGTTTACTCC
GGCAACGGTC TGCGTGGTTA CGGCAACCTC ATTATCATCA AACACGATGC AACTTACCTC
ACGGCGTATG CACACAATCG CGCTTTGATG GTAAAAGAGG GGGACGCGGT AACGAAGGGG
CAGAAGATCG CCGAGATGGG TAACAGCGAT GCCGACCGCG TGATGCTGCA TTTCGAGGTT
CGCCGGCAGG GTAAGCCTGT CGATCCGCTG AAGTATTTGC CGCCTCAATA A
|
|---|
| Protein sequence | MSMLRAMQNN RSREPLTFAQ RAICVAAFST LLAACATRLD NAPVVDRSGS LGTTAAAQPA
VPLGPPPPGF YRVKPGDTLY RIALENGQNY RDIATWNNLA NPNQIEVDQL LRVAPPGGAA
VAGTPAAAPI VGGAVATAPL SSGPAAPAAG TSSALAATPP AAATGSSDTA AAPSGPVTFA
WPARGPVLNG FDDAKNKGVN IGGTAGEAVK AAADGRVVYS GNGLRGYGNL IIIKHDATYL
TAYAHNRALM VKEGDAVTKG QKIAEMGNSD ADRVMLHFEV RRQGKPVDPL KYLPPQ
|
|---|
| |