| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1817 |
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| Symbol | rumA |
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| ID | 4450620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 2018880 |
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| End bp | 2020277 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639693861 |
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| Product | 23S rRNA 5-methyluridine methyltransferase |
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| Protein accession | YP_835461 |
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| Protein GI | 116689838 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.17151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCGAAG CCGTCCCCAC TTCTGCGCGC AAATCGAAAA ACGCGCCCGT CGCGCCCGGG
CCCGCCCCGG TTCTCGAGAT CGAATCGCTC GACATGGAAG CGCGCGGTGT CGGCCGCACG
ATGACCGAGG ACGGCGAGCC GGGCAAGGTG ATCTTCGTCG AAGGCGCGCT GCCGGGCGAA
CGCGTGACCT ATTCGAGCTA TCGCCGCAAG CCGAGCTACG AGCAGGCGAC GGTTGTCGAC
ATTCTGCGCC CGAGCGTGAT GCGCACCCAG CCGAAGTGCA CGTTCTTCGG CACCTGCGGC
GGCTGCTCGA TGCAGCATCT CGACATGCGC GCGCAGGTGG CGGTCAAGCA GCGCGTGCTG
GAAGATAACC TGTGGCACCT GGCGAAGCTG CGCGCGGAAA CGATGTTCGC GCCGATCCAC
GGCCCGTCGT GGGGCTATCG CTACCGGGCG CGCCTGACCG TGCGCAACGT CGCGAAGAAG
GGCGGCGTGC TGGTCGGCTT CCACGAGAAG AAGAGCAGCT ACGTGGCCGA CATGACGAGC
TGCGAAGTGC TGCCGCCGCA CGTGTCGGCG ATGCTCGTGC CGCTGCGGCG GCTCGTCGAG
GGGCTGTCGA TTCGCGACCG GATGCCGCAG ATCGAGCTCG CGGTCGGCTC GACCGTCACG
GCGCTCGTGC TGCGTGTGCT GGAGCCGATC AATGCGGATG ACGAAGCGCT GCTGCGCGCG
TTCGCTGACG AGCACAAGGT GCAGTTCTGG CTGCAGCCGA AGGGGCCGGA CACGGTGACG
CCGTTCTATC CGCTCGACGT GTCGCTCGAC TACACGCTGC CGGAATTCGG CATCCGCATG
CCGTTCAAGC CGACTGATTT CACGCAGGTC AATCACCAGA TCAACCGCGT GCTGGTGGGC
CGCGCGCTGC GCCTGCTCGC GCCGTCGCGC GACGATCGCG TGCTCGACCT GTTCTGCGGG
ATCGGCAACT TCACGCTGCC GCTCGCGCGG CTGTCGCGCG AAGTGATGGG CATCGAGGGC
AGCGACACGC TGACCACGCG CGCACTGGCG AACGCACGCG AGAACGGTGT CGACGGCCAC
ACGACGTTCG CGTGCCGGAA CCTGTTCGAG GTGACGGGCG ACGATCTCCG TGCGCTCGGC
GCATTCGACA AGTTCCTGAT CGACCCGCCG CGCGAAGGCG CGCTCGCGGT GTCGAAGGCG
CTGGCCGAGA TCGCGCAGAG CGGCGCAGGC CCGTTGCCGA AGCGCATCGT CTACGTGTCG
TGCAACCCGT CGACGCTCGC GCGCGATGCG GGCCTGCTCG TGCACGAGGC CGGCTACCGG
CTGAAGGGCG CCGGGGTCGT GAACATGTTC CCGAATACGT CGCACGTCGA ATCGATCGCG
CTGTTCGAGC GCGACTGA
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| Protein sequence | MSEAVPTSAR KSKNAPVAPG PAPVLEIESL DMEARGVGRT MTEDGEPGKV IFVEGALPGE
RVTYSSYRRK PSYEQATVVD ILRPSVMRTQ PKCTFFGTCG GCSMQHLDMR AQVAVKQRVL
EDNLWHLAKL RAETMFAPIH GPSWGYRYRA RLTVRNVAKK GGVLVGFHEK KSSYVADMTS
CEVLPPHVSA MLVPLRRLVE GLSIRDRMPQ IELAVGSTVT ALVLRVLEPI NADDEALLRA
FADEHKVQFW LQPKGPDTVT PFYPLDVSLD YTLPEFGIRM PFKPTDFTQV NHQINRVLVG
RALRLLAPSR DDRVLDLFCG IGNFTLPLAR LSREVMGIEG SDTLTTRALA NARENGVDGH
TTFACRNLFE VTGDDLRALG AFDKFLIDPP REGALAVSKA LAEIAQSGAG PLPKRIVYVS
CNPSTLARDA GLLVHEAGYR LKGAGVVNMF PNTSHVESIA LFERD
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