Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1807 |
Symbol | hfq |
ID | 4450951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 2008450 |
End bp | 2008689 |
Gene Length | 240 bp |
Protein Length | 79 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639693851 |
Product | RNA-binding protein Hfq |
Protein accession | YP_835451 |
Protein GI | 116689828 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACA AAGGGCAATT GTTACAAGAC CCGTTTTTGA ACGCACTGCG CAAAGAGCAC GTTCCCGTTT CGATCTACCT CGTCAACGGC ATCAAGCTTC AAGGGAACAT TGAATCGTTC GACCAGTACG TCGTGTTGCT CCGTAATACG GTGACCCAGA TGGTTTACAA GCACGCCATC TCGACGGTCG TGCCGGCGCG CCCGGTGAAT TTCCACCCGG ACGCGGAAGC CTCGTCCTAA
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Protein sequence | MSNKGQLLQD PFLNALRKEH VPVSIYLVNG IKLQGNIESF DQYVVLLRNT VTQMVYKHAI STVVPARPVN FHPDAEASS
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