Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1793 |
Symbol | |
ID | 4450562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 1990987 |
End bp | 1992195 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639693837 |
Product | RluA family pseudouridine synthase |
Protein accession | YP_835437 |
Protein GI | 116689814 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCGTT CAAGTTCGCA GAATGCCCAG CCGGGCACAC CAAATCGCGA AGATTATAGC CCAAGCGATC GGCCCGCCGA CGCTGCGTCG GGGGATTCCC TCGATGACGA TCTGGCCGGC GACGCGATGC AGCCGCCCGT CGTGCCGTCC GCGGCGGTCG ACGAGGCGCC GCGCGTCGTC GAAGTGCCGC TGTCGCTCGC GGGTGAACGC CTCGACAAGG CGCTTGCCCA ACTGTTCCCC GAATTCTCGC GCAGCCGCCT GCAGAGCTGG ATCGAGGCGC AGCGCGTGCT CGTCGACGGC GCGCCGGCGA AGATCCGTCA GCCGGTGCCG CTCGGCGCGA AGATCGCGCT CGTGCCCGAT CTGTTGCCCG AGCAGCTCGC GTTCACGCCG GAGCCCGTGC CGCTCGACGT GATCTACGAG GACGACGCAC TCGTCGTCAT CAACAAGCCG GCCGGCCTCG TCGTGCATCC GGCCGCCGGC AACTGGAGCG GCACGATCCT CAACGGTCTG CTGCATCGCT ACGGCGACGC GGCCGCCGGC CTGCCGCGCG CGGGGATCGT CCACCGGCTC GACAAGGAAA CCTCCGGCCT GATGGTGGTC GCCCGCACGC TGGCCGCGCA GACCGACCTC GTGCGTCAGC TGCAGGCCCG CACGGTGAAG CGCCGCTATT TCGCGCTCGT GTGGGGCACG ATGCCCGAGG AGGGCACGAT CGACGCGCCG ATCGGCCGCG ATCCGCGCGA ACGCACGCGC ATGGCCGTCG TCACCGGCGC GTCGGGCAAG CCCGCTCGCA CGCATTTCCG CACGGTTGAC ACATGCCTGT GGCAACGTCA GCCGGTTTCG GCGATTCAGT GCGATCTCGA AACCGGCCGC ACGCACCAGA TCCGCGTGCA CTGCGCGCAC GCCGGGCATC CGCTGCTCGG CGATCCGGTC TACGGGCGTG CGCGCGGCAA GCGCTCGGTC ACGCCGCTGC CGGACGGGTT CGCACGACAG GCGCTGCATG CGTGGCGGCT CGGCCTCGTG CATCCGGTCA CGGGCAAGGC GATGCAGTGG CGCTGCCCGC TGCCGGACGA CATGAACACG CTGGTCGCCG CGCTGGGCTT CGGGCAGGGC GACGAGGAAT TCGACGACGA CGACGGTGTC TACGACGATG ACGACTTCGG CGGCGAGTAT CACGACGACG AGCCGTACCT GGACGACGAG GAGGAGTGA
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Protein sequence | MTRSSSQNAQ PGTPNREDYS PSDRPADAAS GDSLDDDLAG DAMQPPVVPS AAVDEAPRVV EVPLSLAGER LDKALAQLFP EFSRSRLQSW IEAQRVLVDG APAKIRQPVP LGAKIALVPD LLPEQLAFTP EPVPLDVIYE DDALVVINKP AGLVVHPAAG NWSGTILNGL LHRYGDAAAG LPRAGIVHRL DKETSGLMVV ARTLAAQTDL VRQLQARTVK RRYFALVWGT MPEEGTIDAP IGRDPRERTR MAVVTGASGK PARTHFRTVD TCLWQRQPVS AIQCDLETGR THQIRVHCAH AGHPLLGDPV YGRARGKRSV TPLPDGFARQ ALHAWRLGLV HPVTGKAMQW RCPLPDDMNT LVAALGFGQG DEEFDDDDGV YDDDDFGGEY HDDEPYLDDE EE
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