| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1770 |
|---|
| Symbol | |
|---|
| ID | 4449442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 1966646 |
|---|
| End bp | 1968238 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639693814 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_835414 |
|---|
| Protein GI | 116689791 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.210956 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTTTCTA CTGCCAACAT CACGATGCAA TTCGGGCCGA AGCCCTTGTT CGAGAATATC
TCGGTCAAAT TCGGCGAGGG CAACCGCTAC GGTCTGATCG GCGCGAACGG CTGTGGCAAG
TCGACCTTCA TGAAGATCCT CGGCGGCGAC CTCGAGCCGA GCGCCGGCAA CGTCGCGCTG
GAGCCGAACG TCCGCCTGGG CAAGCTGCGC CAGGACCAGT TCGCGTACGA AGACGTGCGC
GTGCTCGACG TCGTGATGAT GGGCCACACC GAGATGTGGG CCGCGATGAC CGAGCGTGAC
GCGATCTACG CGAACCCGGA CGCCACCGAC GACGACTACA TGCACGCGGC CGAACTCGAA
GGCAAGTTCG CCGAATACGG CGGCTACGAC GCCGAGGCGC GCGCGGGCGC GCTGCTGCTC
GGCATCGGCA TCGAGGAGAA GTTCCACAAC GGCACGATGG CCGACGTCGC GCCGGGCTGG
AAGCTGCGCG TGCTGCTCGC GCAGGCGCTG TTCTCGAAGC CGGACGTGCT GTTGCTCGAC
GAACCGACCA ACAACCTCGA CATCAACTCG ATCCGTTGGC TCGAGCAGAC GCTCAACGAG
TACAACTCGA CGATGATCAT CATCTCGCAC GATCGTCACT TCCTGAACTC GGTGTGCACG
CACATGGCCG ACATGGACTT CGGCACGTTG AAGGTCTGGC CGGGCAACTA CGACGACTAC
ATGCTCGCGT CGGCACAGGC GCGCGAGCGT CAGGCCGCGG CGAATACGCG TGCGAAGGAG
CGCGTGGCCG AGCTGCAGGA CTTCGTGCGC CGCTTCTCGG CGAACAAGTC GAAGGCGCGC
CAGGCCACCA GCCGCGCGAA GCAGATCGAC AAGATCAAGA TCGAGGAATT CAAGCCGTCG
TCGCGCCAGA ACCCGTTCAT CCGCTTCGAG TTCGAGAAGA AGCTGCACAA CGTCGCGGTG
GTCGCCGAAG AGATCACCAA GAAGTACGAG CGCACGATCT TCCAGAACTT CAACCTGTCG
GTCCAGCCGG GCGAGCGCAT CGCGATCATC GGCGAGAACG GCGCGGGCAA GACGACGCTG
CTGCGCTCGC TGCTCGGCGC GCTGCCGCTC GATCACGGCA CGGTGAAGTG GTCCGAGAAC
GCGAACGTCG GCTACATGCC GCAGGACACG TACGAGGAGT TCCCGAACGA CATCACGCTG
ATGGACTGGA TCGACCAGTA CCGCAAGGAC GGCGACGACG AAACGATGGT GCGCGGCACG
CTGGGCCGCC TGCTGTTCTC GTCGGACGAC ATCAAGAAAT CGGTGAAGGT GCTGTCGGGC
GGCGAGAAGG GCCGCATGAT CTGGGGCAAG CTGATGCTCG GCCGCCACAA CGTGCTGCTG
ATGGACGAGC CGACCAACCA CATGGATATG GAGTCGATCG AGTCGCTGCA GATCGCGCTC
GAGCAGTTCG AAGGCACGCT GATTTTCGTG TCGCACGACC GCGAGTTCGT GAGCGGGCTG
GCGAACCGGA TCATCGAAGT GAAGACGGAC GGGACGCTGT TCGACTTCGG CGGGAATTAT
GAGGAGTTCC TGACGAGTCA GGGGCAGGAG TAA
|
|---|
| Protein sequence | MLSTANITMQ FGPKPLFENI SVKFGEGNRY GLIGANGCGK STFMKILGGD LEPSAGNVAL
EPNVRLGKLR QDQFAYEDVR VLDVVMMGHT EMWAAMTERD AIYANPDATD DDYMHAAELE
GKFAEYGGYD AEARAGALLL GIGIEEKFHN GTMADVAPGW KLRVLLAQAL FSKPDVLLLD
EPTNNLDINS IRWLEQTLNE YNSTMIIISH DRHFLNSVCT HMADMDFGTL KVWPGNYDDY
MLASAQARER QAAANTRAKE RVAELQDFVR RFSANKSKAR QATSRAKQID KIKIEEFKPS
SRQNPFIRFE FEKKLHNVAV VAEEITKKYE RTIFQNFNLS VQPGERIAII GENGAGKTTL
LRSLLGALPL DHGTVKWSEN ANVGYMPQDT YEEFPNDITL MDWIDQYRKD GDDETMVRGT
LGRLLFSSDD IKKSVKVLSG GEKGRMIWGK LMLGRHNVLL MDEPTNHMDM ESIESLQIAL
EQFEGTLIFV SHDREFVSGL ANRIIEVKTD GTLFDFGGNY EEFLTSQGQE
|
|---|
| |