Gene Bcen2424_1762 details

Gene Information

• Locus tag: Bcen2424_1762
• ID: 4449378
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia HI2424
• Kingdom: Bacteria
• Replicon accession: NC_008542
• Strand: +
• Start bp: 1959272
• End bp: 1959868
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639693806
• Product: polysaccharide deacetylase
• Protein accession: YP_835406
• Protein GI: 116689783
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0726] Predicted xylanase/chitin deacetylase

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCTCCA TTCACCTCAG TTTCGACGAC GGCCCCGGCC CCTCGACGCC TGCGCTGCTC 
GACGTGCTGC ACGACGCATC CTGCACGGCG ACCTTCTTCG TGCTCGGCAA GCATCTCGCG 
GGCGCGCTCG ACGTCGCAAC GAGAATCGCG CGCGACGGCC ACCGGCTCGG CAATCACACC 
TATTCGCACG CGAAGCCCGG CGCGCTCGCC AACGCCGCAC TCATCGACGA GATCGACACG 
ACCGACGCGC TGATTCGCGA CGTCTACCGC CGCGCCGGCT TTCCCGCACC GAACGCGATC 
CCGCTGCGCC TTCCATACGG GTTGATGCCG CAGGACGATC GCGCAGCCGT GCTCGCGCGC 
GCACAACGCG AACACACGGG CTGGACCGCG ATCCTGGACG ACTGGCAGCG GCCGGCGCCG 
TCGCCGCAGG CGCTGTTCGA CGCGATGTGC GCGCATGCCG ATGCCTGCGC GGCGCAGCAT 
CGCGACGTGC TGTTCTGCCT GCACGACGGA TCACGGCACG GCGACACGCG GCCCAACACG 
GTCGAAGCGG TGCGGCTGTT CCTGAACCGG CAGCGCGCTG CCGCCATGCC CCGTTAG 

 

Protein sequence

MISIHLSFDD GPGPSTPALL DVLHDASCTA TFFVLGKHLA GALDVATRIA RDGHRLGNHT 
YSHAKPGALA NAALIDEIDT TDALIRDVYR RAGFPAPNAI PLRLPYGLMP QDDRAAVLAR 
AQREHTGWTA ILDDWQRPAP SPQALFDAMC AHADACAAQH RDVLFCLHDG SRHGDTRPNT 
VEAVRLFLNR QRAAAMPR