Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1748 |
Symbol | |
ID | 4449364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 1944284 |
End bp | 1945105 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639693792 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_835392 |
Protein GI | 116689769 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.710361 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCGA ATCGCTACCT GCAGTTCGCG GCGCTGTTCG TCGGTTTCGC GTTCCTGTAC ATCCCGATCA TCAGCCTGAT CGTCTATTCG TTCAACGAGT CGAAGCTCGT CACCGTGTGG TCGGGCTTCT CGTTCCGCTG GTACGCGGCG CTCGTCGAGG ACGACGAGCT GCTGACGGCC GCGTGGCTGT CGCTGAAGAT CGGCGTGCTG ACCGCGTTTG CGTCGGTGTT CATCGGCACG TGGGCCGGCT TCGTGCTCGC ACGGATGGGA CGCTTTCGCG GCTTCGCGCT GTTCAGCGGG ATGATCAACG CGCCGCTCGT GATTCCCGAG GTGATCCAGG GGATCTCGCT GCTGCTGCTG TTCATCGAGC TCGCGAAGTG GATCGGCTGG CCGGCCGAGC GCGGCGTGTT CACGATCTGG CTCGGCCACG TGATGCTGTG CATCTCGTAC GTCGCGATCA TCGTGCAGTC GCGCGTGCGC GAGCTGAATC CGTCGCTGGA AGAGGCCGCG CTCGATCTCG GCGCGACCCC GCTGAAGGTG TTCTTCACGA TCACGCTGCC GCTGATCTCG CAGGCGCTGA TCGCGGGCTG GCTGCTGTCG TTCACGCTGT CGATCGACGA TCTGGTGCTA TCGGCGTTCC TGTCGGGCCC CGGCTCGACG ACGCTGCCGC TCGTCGTGTT CTCGCGCGTG CGCCTTGGCC TGAACCCGGA GATGAACGCG CTCGCGACGC TGTTCATCAT CGCGGTGACG GCCGGCGTCG TGATCGCGAA CTTCGTGATG CTGCGTCAGG AGCGCAAGCG GCTGGCGGGG TTCGCGGCCT GA
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Protein sequence | MKPNRYLQFA ALFVGFAFLY IPIISLIVYS FNESKLVTVW SGFSFRWYAA LVEDDELLTA AWLSLKIGVL TAFASVFIGT WAGFVLARMG RFRGFALFSG MINAPLVIPE VIQGISLLLL FIELAKWIGW PAERGVFTIW LGHVMLCISY VAIIVQSRVR ELNPSLEEAA LDLGATPLKV FFTITLPLIS QALIAGWLLS FTLSIDDLVL SAFLSGPGST TLPLVVFSRV RLGLNPEMNA LATLFIIAVT AGVVIANFVM LRQERKRLAG FAA
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