Gene Bcen2424_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1717 
Symbol 
ID4449333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp1911440 
End bp1912141 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content66% 
IMG OID639693762 
ProductTonB family protein 
Protein accessionYP_835362 
Protein GI116689739 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCG AAGAGCATCT GGTTGCTTCG AACAGCGGTC TGGCCACGCT GGGCCGTCCG 
CGGGAATTCG GCAAGAAGCA GCAGAATCCG GTGCGCCGTT TCGGCGGCAT CGCAGTCGTC
CTCCTGTTGC ATGCAGTGCT GATCTACGCA TTGCTCAATG GCCTCGCGAC CAAGGTCGTG
CAGGTGATCC AGCATCCGAT CGAAACCCGC ATCATCGAGC CGGTGAAGCC GCCGCCGCCC
CCGCCGATGC CGGTCGTCAA GCTTCCGCCG CCGAAGTTCG CGCCGCCGCC GCCGCCGTTC
GTGCCGCCGC CCGAAGTGCC GGTGCAGGCA CCCCCGCAGC AGGCGACCAT CACGCACCAG
TCGGCACCGG TGCCGTCCGC GCCGGCCGTG CAGGCGCCGG TCGTCGCACC GCCCGCGCCG
GCCAAGCCGG TCAGTCACGA AGTGGGTGTC GTCTGCCCGA ATTCGGACTC GATGCGCGCG
TCGATGCAGT ACCCGAAGGA AGCGCAGGAA AACAACATCA CGGGTGACGT GACGATCGAG
TTCGTCGTGG ATGCGGAAGG GAACATCACG AACGAACGCG TGGCCCAGTC GGCCGACCCC
GTGCTCGATC GTGCGGCCTA CAACACCGTG AAGCGGTTCA AATGCGTGGC GCAAGGCCAG
GCGGTACGGG TGCAGGTGCC GTTCTCGTTC AACCTGAATT GA
 
Protein sequence
MKVEEHLVAS NSGLATLGRP REFGKKQQNP VRRFGGIAVV LLLHAVLIYA LLNGLATKVV 
QVIQHPIETR IIEPVKPPPP PPMPVVKLPP PKFAPPPPPF VPPPEVPVQA PPQQATITHQ
SAPVPSAPAV QAPVVAPPAP AKPVSHEVGV VCPNSDSMRA SMQYPKEAQE NNITGDVTIE
FVVDAEGNIT NERVAQSADP VLDRAAYNTV KRFKCVAQGQ AVRVQVPFSF NLN