Gene Bcen2424_1676 details

Gene Information

• Locus tag: Bcen2424_1676
• Symbol: cbiD
• ID: 4449190
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia HI2424
• Kingdom: Bacteria
• Replicon accession: NC_008542
• Strand: +
• Start bp: 1863691
• End bp: 1864779
• Gene Length: 1089 bp
• Protein Length: 362 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 639693721
• Product: cobalt-precorrin-6A synthase
• Protein accession: YP_835321
• Protein GI: 116689698
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1903] Cobalamin biosynthesis protein CbiD
• TIGRFAM ID: [TIGR00312] cobalamin biosynthesis protein CbiD

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.00978786
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCGACG AAACCCCCGA ACAACCCGCG CCGCTGCGCT TCGGCTACAC GACAGGCAGC 
TGCGCGACCG CGACTTCGCT TGCGGCCGCG CGGCTGCTGC TCGCGGGTCA GGCGGACGAC 
GCGGTCGAGA TCGTGCTGCC GAAGGGGCAG CGCGTGATGA TGCGGCTCGA GTTCTGCCGC 
GCGACGGCCG ACGGCGCCGA AGCCGGCACG ATCAAGGATG CCGGCGACGA TCCGGACGTC 
ACGCATGGCG CGCTGATCTT CGCACGCGTC GCGCTCGCGG CGGCGCCCGG CGTGCGCTTT 
CATGCCGGGC CGGGCGTCGG CACGGTCACG CGCGCGGGGC TGACGTTGCC GGTCGGCGAA 
CCGGCGATCA ATCCGGTGCC GCGCCAGATG ATGACTACCC ACCTCGAAGC GCTCGCCGCT 
GAACACGGCT ACGCGGGCGG CTTCGACGTG ACGATCGGCG TCGAAGGCGG CGAGGCGCTT 
GCGCTGAAGA CGATGAACCC GCGCCTGGGC ATCGTCGGCG GGCTGTCGAT CCTCGGCACG 
ACCGGCATCG TGCGGCCGTT CTCGTGTTCG GCCTATATCG CGTCGATTCA TCAGGGCATC 
GACGTCGCAC GGGCGAACGG CATCGCGCAT ATCGCCGCCT GCACGGGCAA CGCCAGCGAG 
GACGCGATGC GCGCGCACTA CCAGTTGCCC GACATGGCGC TGATCGAGAT GGGCGATTTC 
GCGGGCGCGG TGCTCAAGCA CCTGCGGCGC GCGCCGGTCG CGCGCCTGTC GATGTGCGGC 
GGCTTCGGCA AGTTGAGCAA GCTCGCGGCC GGCCATCTCG ACCTGCACAG CCGCCATTCG 
AGCATCGACC TGCCGTTGCT CGCGCAATGG GCGGCCGAAG CCGGCGCGAA CGAGGCGCTG 
CAGGCCGCGA TGCGCGCGGC CAACACGAGC CAGGAAGCGT TGAAACTGGC GCAGGCCGAC 
GGCGTGCCGC TCGGCGATCT CGTCTGCGCG CATGCGCTGC GGGTGGCACG CGACATCGTG 
CCGCCGTCGG TCGCGGTCGA GATGTTCGCG ATCGACCGGC AGGGCCGCTT CGTCGGGGCG 
GCGCGATGA 

 

Protein sequence

MRDETPEQPA PLRFGYTTGS CATATSLAAA RLLLAGQADD AVEIVLPKGQ RVMMRLEFCR 
ATADGAEAGT IKDAGDDPDV THGALIFARV ALAAAPGVRF HAGPGVGTVT RAGLTLPVGE 
PAINPVPRQM MTTHLEALAA EHGYAGGFDV TIGVEGGEAL ALKTMNPRLG IVGGLSILGT 
TGIVRPFSCS AYIASIHQGI DVARANGIAH IAACTGNASE DAMRAHYQLP DMALIEMGDF 
AGAVLKHLRR APVARLSMCG GFGKLSKLAA GHLDLHSRHS SIDLPLLAQW AAEAGANEAL 
QAAMRAANTS QEALKLAQAD GVPLGDLVCA HALRVARDIV PPSVAVEMFA IDRQGRFVGA 
AR