| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1639 |
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| Symbol | |
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| ID | 4448840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 1806227 |
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| End bp | 1808050 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639693684 |
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| Product | cyclic peptide transporter |
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| Protein accession | YP_835284 |
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| Protein GI | 116689661 |
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| COG category | [P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0715869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCTCGC CCCGCCGCTT TCGCGTCAGA TTTGCCGTTT CCGCGTTATT GCCTGCCTTC
CCTTTACCGA CGTTGCCGAT GACAGCCGCC CACGAGCCTT CTTCCCCGCC GTCCCTCGAC
GCTCCCCCCG GCCGCCCCGC GGCGCGCCTG ATCCTTGCGC TGCTGCGCGA AAGCCGCGTG
TCGCTCACGC TGGCGCTCAC CGCATGCGTG CTGAACGGCG TCGCGAGCGT GCTGCTCGTC
GCGACGCTGA ACCGCGCGCT GTCACAACCG GGCGCCGCCG ACGCGGCGCT CGCGTGGCGC
TTCGCCCTGT GCGCGGTGAT CGCGCTCGTC ACGCGGATCG TGTCGGGCAC GCTGTTCGCC
CGCCTGTCGC AGGACACGAT GGCGCGCTTG CGCGTGCATC TGGCGCGGCG CGTCGGCGCG
GCCGAGCTGC GCGACATCGA GCGGATCGGC GCGGCGCCCG TGCAGTCGGT GCTGACCGAC
GACGCGACCA ACGTGTCGAT GCTGTTCTTC GCGCTGCCGA ACCTGGTCAT GCACGGCTCG
ATCGTGTTCG GCTGCCTCGG CTATCTGGCG TGGCTGTCGT GGCCCGTGTG CCTGCTGGCG
CTGGCCGCGA TCATCGCCGG CTCGCTCGGC TATCACACCG GCGATCGCCG CGCGATCGCG
GCGCTCGAAG CCGCCGGCCA GGCGCAGGAC CGCCTGTTCG GCTATCTCGG CTCACTGTTC
TCCGGCGCGA AGGAGCTGAA GCTGCACGAT GCGCGCGCCC GCCAGTTCGT CGACGGCCAG
CTCGGCGCCG CGATCGGCGA AGTGCGCGAC CACCGCCGCC GCGCGTTCAG CGCGTACGCG
GTCGGGGTCG GCTGGATCAT CTTCCTGTTC TACGTGTTCC TCGGCGTCGC GTCGTTCTGG
CCGCAGCTCG GCGTGCATGC CGATCCGGCC ACGGCGGCCG GCTACGTCGT CGTGTTCCTG
TTCATGCTCG TGCCGCTCGA CGGCCTGCTG AACAACCTGC CGACCGTCAA TGCGGCGCGC
GTGTCGCTCG GGCGGATCGA AGGCGTGATG GCCGAATTCG GCGCGCTGCG CACGGTGCCG
CCCGCGGCCG ATGCGCCCGA CGTGCCGCCG GCCGGCGCCG TCACGCTGCG CGGCGTCACG
CACGCGTATT TCCACGAACG CGACGAACGG ATGTTCAGCA TCGGGCCGAT CGACCTGACG
ATCAAGCCGG GCGAGCTCGT GTTCATCGTC GGCGGCAACG GCAGCGGCAA GACCACGCTC
GCGAAGGTGC TGACCGGGCT CTACGAGCCC GAGCAAGGCA CGATCGAGGT CGACGGCCGC
ACGATCGGCT GGCGCGAGCG CGCGGCCTAC CGGCAGCGCT TCAGCGCGGT GTTCAACGAT
TTCCACCTGT TCGATGCGCT GCTCGGCATC GTCGACCCCG ACGATCCGTC GCGTGCGCAG
GCCGATGCAC GGGCGAACGC GCTCGTCGCG AAACTCGCGC TCGATCACAA GGTGAAGGTG
GTCGACGGCG CGTTCTCGAC GCGCGCGCTG TCGACCGGCC AGCGCAAGCG GCTCGCGCTC
GTCGTCGCGT ACCTGGAAGA TCGCCCGTTC TACCTGTTCG ATGAATGGGC GGCCGACCAG
GACCCGTCGT TCAAGGCCGT GTTCTACGAG CAACTGCTGC CGGAGCTGCG CGCGCGCGGC
AAGGCCGTGA TCGTGATCAC GCACGACGAC CGCTACTTCA ACCTCGCCGA CCGTCTGCTG
AAGCTCGACA ACGGGCGCAT CGTCAGCGAT ACGCAACCGG CGCGCCTGCG TGCGCAGGAT
GGCGTCGATG CGCTGAGCGC GTAA
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| Protein sequence | MGSPRRFRVR FAVSALLPAF PLPTLPMTAA HEPSSPPSLD APPGRPAARL ILALLRESRV
SLTLALTACV LNGVASVLLV ATLNRALSQP GAADAALAWR FALCAVIALV TRIVSGTLFA
RLSQDTMARL RVHLARRVGA AELRDIERIG AAPVQSVLTD DATNVSMLFF ALPNLVMHGS
IVFGCLGYLA WLSWPVCLLA LAAIIAGSLG YHTGDRRAIA ALEAAGQAQD RLFGYLGSLF
SGAKELKLHD ARARQFVDGQ LGAAIGEVRD HRRRAFSAYA VGVGWIIFLF YVFLGVASFW
PQLGVHADPA TAAGYVVVFL FMLVPLDGLL NNLPTVNAAR VSLGRIEGVM AEFGALRTVP
PAADAPDVPP AGAVTLRGVT HAYFHERDER MFSIGPIDLT IKPGELVFIV GGNGSGKTTL
AKVLTGLYEP EQGTIEVDGR TIGWRERAAY RQRFSAVFND FHLFDALLGI VDPDDPSRAQ
ADARANALVA KLALDHKVKV VDGAFSTRAL STGQRKRLAL VVAYLEDRPF YLFDEWAADQ
DPSFKAVFYE QLLPELRARG KAVIVITHDD RYFNLADRLL KLDNGRIVSD TQPARLRAQD
GVDALSA
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