| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1628 |
|---|
| Symbol | |
|---|
| ID | 4448829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 1796492 |
|---|
| End bp | 1797283 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639693673 |
|---|
| Product | pili assembly chaperone |
|---|
| Protein accession | YP_835273 |
|---|
| Protein GI | 116689650 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.254202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGGC CGCGCGGGGC GAACGATGAT TTCACGGACC CAGCGATGAA GCATTCCTTT
TCCCTTTCCT TCCCGCGGCG CGCGCTGTGC GCGTTCGCGA CCGTCGGTGC GCTGCTTGCC
GGCGCCGCCC ATGCGGCGAT CGTGCCCGAT CGCACGCGCG TGATCTTCAA CGAAGGCGAA
CAGGCCGCGA TCGTGACGAT CACCAACAAG AGCACGACGT ATCCGTATCT CGTGCAGTCG
TGGCTCGAAG ATGCGAACGG CAACAAGATC ACGTCGCCGC TGATGGTCGT GCCGCCGCTG
CAGCGGGTCG AGGCGAACGA GCGCAACGTG CTGCGGATCG CGAAGCTGCC CGGTACGCAA
CTGCCGGCCG ATCGCGAAAC GGTGTTCTAC CTGAACATCC GCGAAGTGCC GCCGAAGACG
GATACGCCGA ACACGCTGCA GATCGCGCTG CACACGCAGA TGAAGCTGTT CTACCGGCCG
AAGGCCGTGC AGCCCGCGCG CGACGAGGAC TGGACGCTGC CGATGACGCT GCGGGTGGAT
GCGGCCGCGC ACAAGCTGGT GTTCGACAAT CCGACGCCTT ACCACGTGAC GGTGGTCGAC
GTGAGCGCGG GCGCGCAGAA GACGCCGGTG CCGATCGAGC CGGTCATGGT GAGCCCGATG
AGCACGGCCG ACGTGCCGTT CAAGGCCGCG ACGCCGTCGA CGCTGTTCGT CACGCACATC
GACGACTACG GCGGCCAGGT GGCGGTCGAG TATGCGTGCG AGGCCGGTGC GTGCAAGAGC
GTGAAGAAAT GA
|
|---|
| Protein sequence | MQRPRGANDD FTDPAMKHSF SLSFPRRALC AFATVGALLA GAAHAAIVPD RTRVIFNEGE
QAAIVTITNK STTYPYLVQS WLEDANGNKI TSPLMVVPPL QRVEANERNV LRIAKLPGTQ
LPADRETVFY LNIREVPPKT DTPNTLQIAL HTQMKLFYRP KAVQPARDED WTLPMTLRVD
AAAHKLVFDN PTPYHVTVVD VSAGAQKTPV PIEPVMVSPM STADVPFKAA TPSTLFVTHI
DDYGGQVAVE YACEAGACKS VKK
|
|---|
| |