| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1624 |
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| Symbol | |
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| ID | 4448209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 1791117 |
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| End bp | 1792577 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639693669 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_835269 |
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| Protein GI | 116689646 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGCGC TGAATGCACG TGGCGCGCTG CGGGCACCGC TCGCGCTGGC CGCCGCGCTC
GCGCTCGCCG GGTGTTCGCT CGCGCCGCGT TACGAGCGTC CGGCCGCGCC GGTGCCGGCG
ACCTATACGC CGGTCGACGG CGGCACGACG CCGGCCGCCG AACCGGCCAC CGCGCAGGAT
GCCGCGCTGC TCGACGACTG GCATGCGTAT TTCACCGATC CGGCGCTGCA GGCGTGGATC
GACGCGGCGC TCGCGAACAA CCGCGACCTA CGGATCGCCG CCGGCCGGCT CGAGGAGGCA
CGTGCGCTGT ACGGCGTGCA GCGCGCGGAC CGGATGCCGT CGGTCGATGC GAATCTCGGC
TATGAACGCG CGCGCCAGTA CGACCCGGTC GTGCGCGAAA GCGCGATCAG CGGGCTGTAT
CGCGCGGGTG TCGGCGTCAG CGCGTACGAG CTCGACCTGT TCGGCCGCGT GCGCAGCCTG
TCCGAGGCGG CGCTCGCCGA CTATTTCGCG ACGGCCGATG CGCAGCGCAC GGTCCGCATC
GGCGTGATCG CCGAAGTGGC GGGCGCATAC GTTTCCGAAC GATCGTTGCA CGAGCAACTG
GCGCTCGCCC AGCGCACGCT CGATGCGCGC GAGCGGATGG CCGCGCTCAC GCAACGCCGC
TATGCCGCCG GCACGAGCGA CGCGATCGAG CTGCGTTCGG CCGAGATGCT GGTGGCGTCC
GCGCGCGCGT CGCAAGCCGC GCTGCAGCGC GAGCATGCGC AGGCCGTCCG CGCGCTGCAA
CTGCTGGCGG GCGATTTCGC GCGCAACGTG CCCGACGACG CGACCGCGCT TGACACGCTG
TCGATCGCGC CCGTGGCGCC GGGTGCGCCG AGCCAGTTGC TCGAACGGCG GCCGGACATC
CGGCAGGCCG AGGGGCGGCT GAAGGCCGCG AACGCGAACA TCGGCGCGGC GCGCGCGGCG
TTCTTCCCGC GCATCGCGTT GACGACCGAC TACGGCTCGG TGAGCGACGC GTTCTCGAAC
CTGTTCGCGG CCGGCACGAG CGTATGGACG TTCGCACCGC GCATCACGCT GCCGATCTTC
GCGGGCGGAC GCAATCGCGC GAACCTCGAC GTTGCGCACG CGCGCAAGGA CATTGCGGTC
GCCGAATACG AGAAGGCAGT GCAGACCGCG TTTCGCGAAG TGGCCGATGC GTTCGCCGCG
CGCGACTGGA TCGACCGGCA GCTGACCGCG CAGCAGGACG TGTATGCGGC GGACGGCGCG
CGGCTGAAGC TCGCGGAGCG TCGTTATGCG GGTGGTGTCG CGACCTATCT CGAACTGCTC
GACGCGCAGC GCAGCACGTA CGAGTCGGGG CAGGAGCTGA TCCGGCTCAG GCAGCTCAGG
CTGGCGAATG CGATCGCGCT GTATCGCGCG CTCGGCGGCG GCTGGGCGCC GGCCACGGCG
GAGGCCGCGG CTTCCGCGTG A
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| Protein sequence | MFALNARGAL RAPLALAAAL ALAGCSLAPR YERPAAPVPA TYTPVDGGTT PAAEPATAQD
AALLDDWHAY FTDPALQAWI DAALANNRDL RIAAGRLEEA RALYGVQRAD RMPSVDANLG
YERARQYDPV VRESAISGLY RAGVGVSAYE LDLFGRVRSL SEAALADYFA TADAQRTVRI
GVIAEVAGAY VSERSLHEQL ALAQRTLDAR ERMAALTQRR YAAGTSDAIE LRSAEMLVAS
ARASQAALQR EHAQAVRALQ LLAGDFARNV PDDATALDTL SIAPVAPGAP SQLLERRPDI
RQAEGRLKAA NANIGAARAA FFPRIALTTD YGSVSDAFSN LFAAGTSVWT FAPRITLPIF
AGGRNRANLD VAHARKDIAV AEYEKAVQTA FREVADAFAA RDWIDRQLTA QQDVYAADGA
RLKLAERRYA GGVATYLELL DAQRSTYESG QELIRLRQLR LANAIALYRA LGGGWAPATA
EAAASA
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