| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1623 |
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| Symbol | |
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| ID | 4448208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 1787977 |
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| End bp | 1791117 |
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| Gene Length | 3141 bp |
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| Protein Length | 1046 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639693668 |
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| Product | multidrug efflux protein |
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| Protein accession | YP_835268 |
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| Protein GI | 116689645 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGTT TCTTCATCGA TCGCCCCGTC TTCGCGTGGG TGATCGCCAT CTTCATCATG
CTGGGCGGCC TGTTCGCGAT CCGCGCGCTG CCCGTCGCGC AGTACCCGGA CATCGCGCCG
CCCGTCGTCA GCATCTATGC GACGTATCCG GGCGCGTCCG CGCAAGTCGT CGAGGAATCG
GTGACCGCGC TGATCGAGCG CGAGATGAAC GGCGCGCCGG GGCTGCTGTA TACGTCCGCG
ACGAGCAGCG CGGGGGCTGC ATCGCTGTAC CTGACGTTCA AGCAGGGCGT GAACGCCGAT
CTCGCGGCCG TCGAAGTGCA GAACCGGCTG AAGACGGTCG ATGCGCGCCT GCCCGAGCCG
GTGCGCCGCG ACGGCATCCA GGTCGAGAAG GCCGCCGACA ACATCCAGCT CGTCGTGTCG
CTGACCTCCG ACGACGGCCG GATGACCGAC GTGCAGCTCG GCGAATACGC GTCGGCGAAC
GTGGTGCAGG CGCTGCGCCG CGTCGAGGGT GTCGGCAAGG TGCAGTTCTG GGGCGCCGAA
TATGCGATGC GGATCTGGCC GGACCCCGTG AAGCTGGCCG GGCACGGCCT CACCGCGTCG
GACATCGCAT CGGCCGTGCG TGCGCACAAC GCGCGCGTGA CGATAGGCGA CATCGGCCGC
AGCGCGGTGC CGGACAGCGC GCCGATCGCG GCGACGGTGT TCGCGGACGC ACCGCTGAAG
ACGCCGGCCG ATTTCGGGGC GATCGCGCTG CGTGCGCAAC CCGACGGCTC CGCATTGTTC
CTGCGCGACG TCGCGCGCAT CGAGTTCGGC GGCAACGACT ACAACTATCC GTCGTACGTG
AACGGCAAGG TCGCGACCGG GATGGGCATC AAGCTCGCGC CGGGCTCGAA CGCGGTGTCC
ACCGAGAAGC GCGTGCGCGC GACGATGGAC GAGTTGTCCA GGTACTTCCC GCCCGGCGTG
AAATACCAGA TCCCGTACGA GACGTCGTCG TTCGTGCGCG TGTCGATGAA CAAGGTCGTC
ACGACGCTGA TCGAGGCCGG CGTGCTGGTG TTCCTCGTGA TGTTCCTGTT CATGCAGAAC
CTGCGCGCGA CGCTGATTCC GACGCTCGTC GTGCCGGTCG CGCTCGCGGG CACGTTCGGC
GTGATGTATG CGGCCGGCTT CTCGATCAAC GTGCTGACGA TGTTCGGGAT GGTGCTCGCG
ATCGGCATCC TCGTCGACGA CGCGATCGTC GTCGTCGAGA ACGTCGAGCG GCTGATGGTC
GAGGAAGGGC TCGCGCCATA CGACGCGACC GTCAAGGCGA TGAAGCAGAT CAGCGGCGCG
ATCGTCGGGA TCACCGTGGT GCTGACGTCG GTGTTCGTGC CGATGGCGTT CTTCGGCGGC
GCGGTGGGCA ACATCTACCG GCAGTTCGCG CTGTCGCTCG CGGTGTCGAT CGGCTTCTCG
GCGTTCCTCG CGCTGTCGCT GACGCCCGCG CTGTGCGCGA CGCTGCTCAA GCCGGTGTCG
GGCGACCATC ACGAGAAGCG CGGCTTCTTC GGCGGGTTCA ACCGCTTCGT CGCGCGGGCG
ACGCAGCGCT ACGCGACGCG GGTCGGCGCG ATGCTGAAGA AGCCGGTGCG CTGGCTCGTC
GTGTACGGCG CGCTGACCGC GGCGGCCGCG CTGATGCTCA CGCAACTGCC GACCGCGTTC
CTGCCGGACG AGGACCAGGG CAACTTCATG GTGATGGTGA TTCGCCCGCA AGGCACGCCG
CTCGCGGAGA CGATGCAGAG CGTGCGCGCG GTCGAGTCGG CCATCCGTCG CGACGAGCCG
ACCGCCTATA CGTATGCGCT CGGCGGCTTC AACCTGTACG GCGAAGGGCC GAACGGCGGG
ATGATCTTCG TCACGCTGAA GAACTGGAAG GAACGCAAGG CCACGCGCGA TCACGTGCAG
TCGATCGTCG CGCGCATCAA CGAGCGCTTC GCGGGCACGC CGAACACGAC GGTGTTCGCG
ATGAACTCGC CGGCGCTGCC CGATCTCGGT TCGTCGAGCG GCTTCGACTT CCGGCTGCAG
AACCGCGGCG GGCTCGACTA CGCGACGTTC AGCGCCGCGC GCGAGCAACT GCTCGCGGTG
GGCGGCAAGG ATCGCGCGCT CACCGACCTG ATGTTCGCGG GCACGCAGGA CGCGCCGCAA
CTGAAGCTCG ACATCGATCG CGCGAAGGCG TCCGCGCTCG GCGTGTCGAT GGACGAGATC
AACACGACGC TCGCGGTGAT GTTCGGCTCC GACTATATCG GCGACTTCAT GCACGGCACG
CAGGTGCGGC GCGTGATGGT GCAGGCCGAC GGGCGGCACC GGCTTGATCC GGACGACGTG
AAGAAGCTGC GCGTGCGCAA CGCGCGCGGC GAGATGGTGC CGCTCGCGGC GTTCACGACG
CTGCACTGGA CGCTCGGGCC GCCGCAGCTC ACGCGCTACA ACGGCTATCC GTCGTTCACG
ATCAACGGCT CGGCCGCGGC CGGCCACAGC AGCGGCGAGG CGATGAGCGC GATCGAGCGG
ATCGCCGCGA AGCTGCCGGC CGGCATCGGC TATGCGTGGT CGGGGCAGTC GTTCGAGGAG
CGGCTGTCGG GCGCGCAGGC GCCGATGCTG TTCGCGCTGT CGGTGCTCGT CGTGTTCCTC
GCGCTCGCGG CGCTCTACGA GAGCTGGTCG ATTCCGTTCG CGGTGATGCT GGTCGTCCCG
CTCGGCGTGA TCGGCGCGGT GCTCGGCGTG ACGCTGCGCG CGATGCCGAA CGACATCTAT
TTCAAGGTGG GACTGATCGC GACGATCGGG CTGTCCGCGA AGAACGCGAT CCTGATCGTC
GAGGTCGCGA AGGATCTCGT CGCGCAGCGC ATGTCGCTCG TCGACGCCGC GCTCGAGGCC
GCGCGCCTGC GGCTGCGGCC GATCGTGATG ACGTCGCTCG CGTTCGGCGT CGGCGTGCTG
CCGCTCGCGT TCGCGTCGGG CGCCGCGTCC GGCGCGCAGA TGGCGATCGG CACCGGCGTG
CTCGGCGGCG TGATCACGGC GACCGTGCTC GCGGTGTTCC TCGTCCCGCT GTTTTTCGTG
ACCGTCGGCC GCCTGTTCGA CGTCGGCCCG CGCCGGCGCG GTGGGGCGCA GCCGACGACG
ATGGAGGGTT CGCAACCATG A
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| Protein sequence | MARFFIDRPV FAWVIAIFIM LGGLFAIRAL PVAQYPDIAP PVVSIYATYP GASAQVVEES
VTALIEREMN GAPGLLYTSA TSSAGAASLY LTFKQGVNAD LAAVEVQNRL KTVDARLPEP
VRRDGIQVEK AADNIQLVVS LTSDDGRMTD VQLGEYASAN VVQALRRVEG VGKVQFWGAE
YAMRIWPDPV KLAGHGLTAS DIASAVRAHN ARVTIGDIGR SAVPDSAPIA ATVFADAPLK
TPADFGAIAL RAQPDGSALF LRDVARIEFG GNDYNYPSYV NGKVATGMGI KLAPGSNAVS
TEKRVRATMD ELSRYFPPGV KYQIPYETSS FVRVSMNKVV TTLIEAGVLV FLVMFLFMQN
LRATLIPTLV VPVALAGTFG VMYAAGFSIN VLTMFGMVLA IGILVDDAIV VVENVERLMV
EEGLAPYDAT VKAMKQISGA IVGITVVLTS VFVPMAFFGG AVGNIYRQFA LSLAVSIGFS
AFLALSLTPA LCATLLKPVS GDHHEKRGFF GGFNRFVARA TQRYATRVGA MLKKPVRWLV
VYGALTAAAA LMLTQLPTAF LPDEDQGNFM VMVIRPQGTP LAETMQSVRA VESAIRRDEP
TAYTYALGGF NLYGEGPNGG MIFVTLKNWK ERKATRDHVQ SIVARINERF AGTPNTTVFA
MNSPALPDLG SSSGFDFRLQ NRGGLDYATF SAAREQLLAV GGKDRALTDL MFAGTQDAPQ
LKLDIDRAKA SALGVSMDEI NTTLAVMFGS DYIGDFMHGT QVRRVMVQAD GRHRLDPDDV
KKLRVRNARG EMVPLAAFTT LHWTLGPPQL TRYNGYPSFT INGSAAAGHS SGEAMSAIER
IAAKLPAGIG YAWSGQSFEE RLSGAQAPML FALSVLVVFL ALAALYESWS IPFAVMLVVP
LGVIGAVLGV TLRAMPNDIY FKVGLIATIG LSAKNAILIV EVAKDLVAQR MSLVDAALEA
ARLRLRPIVM TSLAFGVGVL PLAFASGAAS GAQMAIGTGV LGGVITATVL AVFLVPLFFV
TVGRLFDVGP RRRGGAQPTT MEGSQP
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