Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1622 |
Symbol | |
ID | 4448207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 1786759 |
End bp | 1787961 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639693667 |
Product | periplasmic multidrug efflux lipoprotein precursor |
Protein accession | YP_835267 |
Protein GI | 116689644 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAACA AACGCACCCA GTGGCGCCGC ATGCGGCTGG CGCCGTTCGC GCTCGCGGCC CTGTTGGCCG TGGCCGGATG CGGAAAGGGC GACAAGGATG CCGCGCCGGA GACCGCGAAG CAGGCCACCG TCGTGACGGT GCGCCCGACG GCCGTGCCGA TGACTGTCGA ACTGCCGGGC CGGCTCGACG CCTACCGGCA GGCGGAAGTC CGCGCGCGGG TCGCGGGCAT CGTCATCGCA CGCACCTACG AGGAAGGCCA GGAAGTGAAG CAGGGCGCGG TGCTGTTCCG CATCGATCCT GCGCCGCTGA AGGCCGCACG CGACGCCGCG CAGGGCGCGC TCGCGAAGGC GCAGGCCGCC GCGCTCGCGG CGACCGACAA GCGCCGCCGT TACGACGATC TCGTGCGCGA CCGCGCGGTG AGCGAGCGCG ACCATACCGA AGCCGTCGCG GCCGATACGC AGGCGAAGGC CGAGGTGGCA TCCGCGAAGG CCGAACTCGC GCGCGCGCAG TTGCAGCTCG ATTACGCGAC CGTCACCGCG CCGATCGCGG GCCGCGCACG GCGCGCGCTC GTGACCGAGG GCGCGCTCGT CGGCCAGGAC CAGGCGACGC CGCTCACGAC CGTCGAGCAG CTCGATCCGA TCTACGTGAA CTTCTCGCAG CCGGCCGCCG ACGTCGACGC CTTGCGTCGC GCGGTGAAGA GCGGGCGCGC GACGGGCATC GCGCAGCACG ACGTCGCGGT GACGCTGCTG CGCGCCGACG GCACCGCGTA TCCGCTGAAG GGCAAGCTGC TGTTCAGCGA TCTCGCGGTC GATCCGACCA CCGACACCGT CGCGATGCGC GCGCTGTTCC CCAATCCGGA GCGCGAGCTG CTGCCGGGCG CGTACGTGCG GATCGCGCTC GACACGGCGG TCGACCAGCG GGCGATCCTG GTGCCGCGCG ACGCGCTGCT GCGCACCGCC GACCGGACGT CGGTGCGGGT CGTCGGCGCG AACGGCAAGG TCAAGGACGT CGAGGTCACG GCCGACCAGA TGAGCGGCCG TGACTGGCGC ATCACGCGCG GCCTCGCGGG CGGCGAGCGC GTGATCGTCG ACGACGCCGC GCAGTTCGCG CCCGATACGG CCGTCAAGCC CGTCGAAAAA GCGCCGCCGT CGAAGGCGGC GCCGGCAGCG GCCGCTTCGC AGGCGGCCGC CCGTCAAACC TGA
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Protein sequence | MNNKRTQWRR MRLAPFALAA LLAVAGCGKG DKDAAPETAK QATVVTVRPT AVPMTVELPG RLDAYRQAEV RARVAGIVIA RTYEEGQEVK QGAVLFRIDP APLKAARDAA QGALAKAQAA ALAATDKRRR YDDLVRDRAV SERDHTEAVA ADTQAKAEVA SAKAELARAQ LQLDYATVTA PIAGRARRAL VTEGALVGQD QATPLTTVEQ LDPIYVNFSQ PAADVDALRR AVKSGRATGI AQHDVAVTLL RADGTAYPLK GKLLFSDLAV DPTTDTVAMR ALFPNPEREL LPGAYVRIAL DTAVDQRAIL VPRDALLRTA DRTSVRVVGA NGKVKDVEVT ADQMSGRDWR ITRGLAGGER VIVDDAAQFA PDTAVKPVEK APPSKAAPAA AASQAAARQT
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