Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1621 |
Symbol | |
ID | 4448206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 1785960 |
End bp | 1786607 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639693666 |
Product | TetR family transcriptional regulator |
Protein accession | YP_835266 |
Protein GI | 116689643 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCGCA AGACCCGGGA AGAATCGCTC GCCATCAAGC ACCGGATCCT CGACGCCGCC GAGCTCGTGC TGCTCGAAAG AGGCGTCGCG CAAACCGCGA TGGCGGACCT CGCCGAGGCC GCCGGGATGT CGCGGGGCGC CGTCTACGGC CACTACCGCA ACAAGATGGA AGTGTGTCTG GCGATGTGCG ACCGCGCGTT CGCGCGCACG TCGGAAGGGT TCGACGCGGG CGACGGCCTG CCGCCGTTCG CGACGCTGCG GCGTGCCGCG TCGCACTATC TGCAGGAATG CGGCGAGCCT GGCCCGATGC AGCGCGTGCT CGTGATTCTC TATACGAAGT GCGAGCAAAG CGAGGAGAAC GGCGCGCTGC AGCGGCGCCG CATGCTGCTC GAGCTGCAGA TGCTGCGGAT CACGAAGGCG CTGCTGCGTC GCGCGATCGC CGCCGGCGAA CTTGCCGTCG ATCTCGACGT GCACCTCGCC GCCGTCTATC TCGTGTCGCT GCTCGAAGGC GTGTTCGCGT CGATGATCTG GACCAACCGG TTGCGCGGCA ACCTGTGGAA CGACGCCGAG GCGATGCTCG ACGCCGGCTT CGACGCCGTG CGCACCTCCG CCGCTCTGCG CCGACGCGCG CAAAAATTGC CGGACTGA
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Protein sequence | MARKTREESL AIKHRILDAA ELVLLERGVA QTAMADLAEA AGMSRGAVYG HYRNKMEVCL AMCDRAFART SEGFDAGDGL PPFATLRRAA SHYLQECGEP GPMQRVLVIL YTKCEQSEEN GALQRRRMLL ELQMLRITKA LLRRAIAAGE LAVDLDVHLA AVYLVSLLEG VFASMIWTNR LRGNLWNDAE AMLDAGFDAV RTSAALRRRA QKLPD
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