| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1619 |
|---|
| Symbol | |
|---|
| ID | 4448204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 1783468 |
|---|
| End bp | 1784193 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639693664 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_835264 |
|---|
| Protein GI | 116689641 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTTT CGCTGCTGCT TTCGAACCTG CCGTACCTGC TCGTCGGCGC GTTTCCGGAC
GGCCCGCTCG GCGGCGCCGC GCTGTCGCTG GTGCTGGCGC TTGCATCCGC GATCGCGTCG
GCCGTGCTCG GCGTGGCGCT CGGCATCGCG ATGGCGCTGG CGCGCGGCCC GGCGCGTGTG
CTGCTGCTCG CGTTCATCGG CTTCTTCCGC GCGATTCCGG TGCTGATGCT GATCTTCTGG
ACGTATTTCC TGATGCCCGT GCTGTTGCAC ATGGATGTGC CGGGGCTCGC GACGGTCGTG
TGCGCGCTGG CGCTGATCGG CGGCGCGTAT CTCGCGCATG CGGTGCATGC GGGGATCGTC
GCGGCGGGCG ACGGTCAATG GCAGGCCGGG CTGTCGCTCG GGCTCACGCG CTGGCAGACG
GTGCGCTACG TGCTGCTGCC GCAGGCGATC CGGATCATGA CGCCGTCGTT CGTCAACCAG
TGGGTCGCGC TCGTGAAGGA CACGTCGCTC GCGTATATCG TCGGCGTGCC GGAGCTGTCG
TTCATCGCAA CGCAGGTGAA CAACCGGCTG ATGGTGTATC CGGCGCCGAT CTTCCTGTTC
GTCGCGCTGA TCTATCTGGT GCTGTGCACG TCGCTCGATG GAGGAGCGCG GTGGTTGCTG
TCGCGGGGGC CGCGCACGCA ACGTGCGGCG CAGGCGACGG CCGAACGCAC GGAACCCGCG
CGGTAA
|
|---|
| Protein sequence | MDLSLLLSNL PYLLVGAFPD GPLGGAALSL VLALASAIAS AVLGVALGIA MALARGPARV
LLLAFIGFFR AIPVLMLIFW TYFLMPVLLH MDVPGLATVV CALALIGGAY LAHAVHAGIV
AAGDGQWQAG LSLGLTRWQT VRYVLLPQAI RIMTPSFVNQ WVALVKDTSL AYIVGVPELS
FIATQVNNRL MVYPAPIFLF VALIYLVLCT SLDGGARWLL SRGPRTQRAA QATAERTEPA
R
|
|---|
| |