Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1616 |
Symbol | |
ID | 4448201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 1780071 |
End bp | 1781375 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639693661 |
Product | major facilitator superfamily metabolite/H(+) symporter |
Protein accession | YP_835261 |
Protein GI | 116689638 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACGTCC AGACCGACCA AGCTGCGCTG TCCGCGCAAG ACACCCGGCG GCGCGTGTTC GCCATCGTCG GCGCCTCATC GGGCAACCTC GTCGAGTGGT TCGACTTCTA CATCTACTCG TTCTGCGCGC TGTACTTCGC GCCGGCATTC TTCCCGAGCG GCAACACGAC GACGCAGCTG CTGAACACGG CCGGCGTGTT CGCGGCCGGC TTCCTGATGC GTCCGATCGG CGGCTGGCTG TTCGGCCGCA TCGCCGACCG GCACGGCCGT CGCGCGGCGA TGATGATCTC GGTGCTGATG ATGTGCGGCG GGTCGCTCGT GATCGCGGTG CTGCCGACCT ATGCGCAGAT CGGCGCGCTC GCGCCGGCGC TGCTGCTGGT CGCGCGCCTG TTCCAGGGCC TGTCGGTGGG CGGCGAATAC GGGACGAGCG CGACCTACAT GAGTGAAGTG GCATTGAAGG GCCGTCGCGG CTTCTTCGCG TCGTTCCAGT ACGTGACGCT GATCGGCGGC CAGCTGTGCG CGCTGCTGGT GCTCGTGATC CTGCAGCAGA CGCTGTCGGC CGGCGAGCTG AAAGCGTGGG GCTGGCGCAT TCCGTTCGTG GTCGGCGCGG CGGCCGCGCT GATTTCGCTG TACCTGCGCA AATCGCTCGA CGAGACGTCG ACGAGCGCAT CGCGCGACAA GAAGGACGCC GGCACGATCC GCGGCGTGTG GCAGCACAAG GGCGCGTTCT TCACGGTGGT CGGCTTCACG GCCGGCGGCT CGCTGATCTT CTACACGTTC ACGACGTACA TGCAGAAGTA CCTCGTGAAC ACGGCCGGCA TGCACGCGAA GACGGCCAGC AACGTGATGA CCGTCGCGCT GCTCGTTTAC ATGCTGATGC AGCCGGTGTT CGGCGCGCTG TCGGACAAGA TCGGCCGCCG CACGTCGATG ATCCTGTTCG GTTCGTTCGC GGTGATCGGC ACGGTGCCGC TGATGCATGC GCTGAAGGGC GTGACGAGCC CGGTGGCCGC GTTCGTGCTG ATCACGGTTG CGCTGGCGAT CGTCAGCTTC TACACGTCGA TCAGCGGCCT GATCAAGGCC GAGATGTTTC CGCCGGAAGT GCGCGCGATG GGCGTGGGCC TGTCGTATGC GGTCGCGAAC GCGATCTTCG GCGGTTCGGC CGAGTACGTC GCGCTGTGGT TCAAGTCGAT CGGCAGCGAG GAAACGTTCT ACTGGTACGT GACCGTGCTG TGCGCGATCT CGCTGATCGT GTCGTGGCGG ATGCGCGATC CGAGCAAGGA AGGGTACCTG CGCCACGAGC CGTGA
|
Protein sequence | MDVQTDQAAL SAQDTRRRVF AIVGASSGNL VEWFDFYIYS FCALYFAPAF FPSGNTTTQL LNTAGVFAAG FLMRPIGGWL FGRIADRHGR RAAMMISVLM MCGGSLVIAV LPTYAQIGAL APALLLVARL FQGLSVGGEY GTSATYMSEV ALKGRRGFFA SFQYVTLIGG QLCALLVLVI LQQTLSAGEL KAWGWRIPFV VGAAAALISL YLRKSLDETS TSASRDKKDA GTIRGVWQHK GAFFTVVGFT AGGSLIFYTF TTYMQKYLVN TAGMHAKTAS NVMTVALLVY MLMQPVFGAL SDKIGRRTSM ILFGSFAVIG TVPLMHALKG VTSPVAAFVL ITVALAIVSF YTSISGLIKA EMFPPEVRAM GVGLSYAVAN AIFGGSAEYV ALWFKSIGSE ETFYWYVTVL CAISLIVSWR MRDPSKEGYL RHEP
|
| |