Gene Bcen2424_1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1608 
Symbol 
ID4448663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp1769217 
End bp1770236 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content69% 
IMG OID639693653 
Productinner-membrane translocator 
Protein accessionYP_835253 
Protein GI116689630 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0142264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAGC CTCCCGTATC CCCGACCGAC GCAGGCGCGC AGCAGGACGT GACGGGGCGC 
CGCGCGCGCA CGCTGTCCGG CACGCGGCTC GGCCTGTCGA ACTATCTCGG GCTGGCCGGC
GCGCTGGCCG CGATGATCGC GCTGTTCTCG GTGCTGAGCT CGCATTTCCT GACCTACGAC
ACGTTCAGCA CGATCGCGAA CCAGATTCCC GATCTCGTCG TGATGTCGGT CGGGATGACC
TTCGTGCTGA TCATCGCCGG GATCGACCTG TCGGTCGGCT CGGTGCTCGC GCTCGCCGCG
TCGATGGTCA GCGTCGCCGC GCTGAAATGG CAGTGGGGGC CGCTGCCGGC CGCGCTGATC
GGGATCGCGG TCGCGACCGC GACGGGCGCG CTGACGGGCG CGGTCACGGT GGGCTGGCGG
ATTCCGTCGT TCATCGTGTC GCTCGGCGTG CTGGAGGCCG CGCGCGGCCT CGCGTACCAG
CTGACGAATT CGCGCACCGC GTATATCGGC GACGCGTTCG ATTTCCTGTC GAACCCGATC
GCGCTGGGCA TTTCGCCGGC GTTCCTGATC GCGGTCGCGG TGATGATCGC GGCCCAGTTC
GTGCTCACGC GCACGGTGTT CGGGCGCTAT CTGGTCGGGA TCGGCACGAA CGAGGAAGCG
GTGCGGCTTG CCGGGGTTAA CCCGAGGCCG TATAAAATCC TCGTATTCGC GCTGATGGGC
GCGCTCGCGG GGCTCGCGTC GCTGTTCCAG ATTTCGCGGC TCGAGGCGGC CGATCCGAAC
GCGGGCGCGG GCCTCGAACT GCAGGTGATC GCCGCCGTCG TGATCGGCGG CACGAGCCTG
ATGGGCGGGC GCGGCTCGGT GATCAGCACG TTCTTCGGCG TGTTGATCAT CTCCGTGCTG
GCCGCGGGGC TGGCGCAGAT CGGGGCGAAC GAGCCGACGA AGCGGATCAT CACGGGTGCG
GTGATCGTGG TGGCGGTCGT GCTCGATACG TATCGCAGCC GGCGTACGCG CGTGCGGTAA
 
Protein sequence
MTQPPVSPTD AGAQQDVTGR RARTLSGTRL GLSNYLGLAG ALAAMIALFS VLSSHFLTYD 
TFSTIANQIP DLVVMSVGMT FVLIIAGIDL SVGSVLALAA SMVSVAALKW QWGPLPAALI
GIAVATATGA LTGAVTVGWR IPSFIVSLGV LEAARGLAYQ LTNSRTAYIG DAFDFLSNPI
ALGISPAFLI AVAVMIAAQF VLTRTVFGRY LVGIGTNEEA VRLAGVNPRP YKILVFALMG
ALAGLASLFQ ISRLEAADPN AGAGLELQVI AAVVIGGTSL MGGRGSVIST FFGVLIISVL
AAGLAQIGAN EPTKRIITGA VIVVAVVLDT YRSRRTRVR