| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1593 |
|---|
| Symbol | |
|---|
| ID | 4448876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 1754362 |
|---|
| End bp | 1755420 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639693638 |
|---|
| Product | permease |
|---|
| Protein accession | YP_835238 |
|---|
| Protein GI | 116689615 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0701] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.303693 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCA CACGCACTCA ACCGAATCCG GCCCTCGGCT GGATGACCTT CCTGCTGATC
GCGGTCGCGG GACTGTTCTA CGTGAAATGG TTCCCGTACT ACAACAAGGC GTTCGTTGCC
GCCGAGCACC ATTCGATCGG CCAGTCGATC CTGATGGGCA CGTCGGCGGC CGCGCCCGAG
CCGTCGCTGA AGGCGGCGCT CGACTACGCG TGGGCATACG GCAAGGCGAT CTGGCAGGCG
ATGGTGCTCG GCCTGCTGCT CGGCTCGGCC GTGCAGGCGC TGCTGCCCGC GCACTGGGTG
GCGCGCGTGC TCGGCCGCAC GGGGTTCGGC AGCGTCGCCG CGGGCGGGCT GCTGTCGCTG
CCCGGGATGA TGTGCACGTG CTGTGCGGCG CCGGTCGTCG CCGGCCTGCG GGCGCGCCAC
GCGTCGCCGG GCGGCGCGGT CGCGTTCTGG CTCGGCAACA CGGTGCTGAA CCCGGCGGCG
CTGGTGTTCA TGGGCTTCGT GCTCGGCTGG CACTGGAGCG CGCTGCGCCT CGTGCTCGGC
ATCGCGATGG TGTTCGGGAT CGGCTATCTG CTGAACCGCA TCGCGCGTCC CGAAGACCGC
AGCATCGATG ATGCGCAGCT CGCCGCGCTG GCAGCGGAGC AGGCCGCGGC CGGCAATCCG
TTCGTCCGCT GGATGAAGCT GCTCGCGCGC ATGGCCGTGC GGCTCGTGCC CGAATACATC
GTGCTCGTGC TGCTGCTCGG CGCCGCGCGC GCGTGGCTGT TCCCGCATAT CGGCCCGGAC
ATCGGCAATC ACCTCGGCTG GATCGTCGCG TTCGCGGTCG CGGGCATGCT GTTCGTGATC
CCGACGGCCG GCGAGGTGCC GATCATCCAG GCGATGCTGT CGCTCGGCAT GGGCGTCGGT
CCGGCCGCCG CGCTGCTGAT GACGCTGCCG CCGATCAGCG TGCCGTCGCT CGCGATGCTC
GCGCGTTCGT TCAAGCCTTA CATGCTGGCG ATCGTCGCGA CGCTCGTCGT CGCATTCGGG
ATCGTGAGCG GCTTGCTTGC GATCGCGTTC GGGTTCTGA
|
|---|
| Protein sequence | MTTTRTQPNP ALGWMTFLLI AVAGLFYVKW FPYYNKAFVA AEHHSIGQSI LMGTSAAAPE
PSLKAALDYA WAYGKAIWQA MVLGLLLGSA VQALLPAHWV ARVLGRTGFG SVAAGGLLSL
PGMMCTCCAA PVVAGLRARH ASPGGAVAFW LGNTVLNPAA LVFMGFVLGW HWSALRLVLG
IAMVFGIGYL LNRIARPEDR SIDDAQLAAL AAEQAAAGNP FVRWMKLLAR MAVRLVPEYI
VLVLLLGAAR AWLFPHIGPD IGNHLGWIVA FAVAGMLFVI PTAGEVPIIQ AMLSLGMGVG
PAAALLMTLP PISVPSLAML ARSFKPYMLA IVATLVVAFG IVSGLLAIAF GF
|
|---|
| |