| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1572 |
|---|
| Symbol | |
|---|
| ID | 4449505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 1734881 |
|---|
| End bp | 1735693 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639693617 |
|---|
| Product | curculin domain-containing protein |
|---|
| Protein accession | YP_835217 |
|---|
| Protein GI | 116689594 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000000136518 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAGG GGATTGTTGT ATTTTTCGGA ATGCTAATGC TGTATATGTC ATCGGCAATT
GCAACGGTGA TTCCTTCTGG GGCCACCCTA AATCTAGGTG CGCAGGTTTG TTCTGAAAAT
GGCCAGTACT GCCTCGACAT GCAAGCGTCC GATGGCAACC TGGTGTTGTA TGGTCCGAGC
GGCGTAGTCT GGTCCGCACA GGTTGCGGGG AAGGGTGTTA CGCGAGCAGT CGTGCAGCCG
GACGGAAATT TCGTTCTGTA CACTTCAGCC AATGTACCTG TGCTCTATTT CAATACCCAG
CACCCGGGTG CATATCTGAA TGTTCAAAAT GACGGCAATC TCGCTCTTTA TTGGGATCGT
CCGGTATGGC AAAGTCATAC CAGCGATACC GGTTCTATTC AGACAAATCA GGGACGTATA
CTACACACCA ATAACAGAAT CCTCGTCGGC ACGAGCTACA CGGTCGGTCA GTATTTCTTG
ATTTTGCAAG CTGATGGTAA TTTCGTTCTT TACAAGAACG GGGGTGCAAT TTGGAATTCA
GGAACCCCGG GCAGAGGTGT TACTGCAGCT TGGATGCAGA ACGATGGGAA TTTCACGCTG
ACCAACGACG CGGGCACTGC GATTTGGCAA ACGAACACGG AAGTGAATTC CAATAATTAC
TTTGCGTTCC AGCCTGATGG AAACCTTGTT GTCTATGCGC CGACTGTAAG CTGGGATCGT
CTTGCTCACT TCAATCACCC GGACTATCTT GATCACGGTG GTGGCAACTA CTGCTTTGCT
TGTACGGCGA AGCCAATCTC AATTCCGTTC TAA
|
|---|
| Protein sequence | MKKGIVVFFG MLMLYMSSAI ATVIPSGATL NLGAQVCSEN GQYCLDMQAS DGNLVLYGPS
GVVWSAQVAG KGVTRAVVQP DGNFVLYTSA NVPVLYFNTQ HPGAYLNVQN DGNLALYWDR
PVWQSHTSDT GSIQTNQGRI LHTNNRILVG TSYTVGQYFL ILQADGNFVL YKNGGAIWNS
GTPGRGVTAA WMQNDGNFTL TNDAGTAIWQ TNTEVNSNNY FAFQPDGNLV VYAPTVSWDR
LAHFNHPDYL DHGGGNYCFA CTAKPISIPF
|
|---|
| |