| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1571 |
|---|
| Symbol | |
|---|
| ID | 4449504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 1733416 |
|---|
| End bp | 1734312 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639693616 |
|---|
| Product | curculin domain-containing protein |
|---|
| Protein accession | YP_835216 |
|---|
| Protein GI | 116689593 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00304753 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTTTG TTACGTCGTT GATTGTTTGC TTGGTAGCTT TAATGCCGAT ACTTTCGAGC
GCGAAGATCC TTGGCTCAAA TGAAACGTTG TCGGCTGGAA ATGTTGTCTA CTCGGATAAC
GGCCAGTATC ACCTTGCGAT GCAAACGGAC GGGAACTTGG TCGTCTATGG ACCGACGGGC
GCAGTATGGC AATCGCAGAC ATCGGGATCT GGCGGCAACA GGGCGGTAAT GCAGGGCGAC
GGAAATCTTG TCATTTATCG TGCCGACAAC ACGGCTGCAT GGTCGTCCAA AACGGCGCAT
CCGGGCGCGT TCCTCGCAGT GCAGGATGAC GGGAACGTGG TGATCTACTG GCCCCGTCCG
GCCTGGGCAA GTAATACCAG TGATCCCGCG ACCCAACAAT CGGCCGAGAG CAAATATCTA
GCTTCGGGCT CCACGATGTC GGCTGGTCAA ACTGTCACTG TCGCCCAATA CATGCTCGTG
TTTCAGGCGG ACGGCAACCT CGTTCTTTAT AAGAATGGCG GTAATCCGAT TTGGTCGACT
GGCACTCAGG GAAAAGGTGC TACGTATGCT GTTATGCAGA GCGACGGAAA TTTTGTAATT
TATGCAGGAT CGACGGCTCT TTGGTCGACT AAGACTAACG GAGCCAATGG AGCGCAACTC
GTTTTACAAT CGGATGGCAA CCTGGTGATT TACGCGCCGA CAGCGGCATG GAGTACAAAG
TTTGGCCTGG TTACGGCTCC GACATCGACG TCGACATCGA ATAACGGGCC GGGCAGCGGT
ATCTGTGTCG GTGTTTGCCC GCCGCACCCC CTCAACGGAA ATCCTTTTTC GCCCGTCGGC
GTTGGTACAA CCGGCCTCGG GTTCCCGACA CCGGGTTATC CGGGTGCCGC CTTCTGA
|
|---|
| Protein sequence | MRFVTSLIVC LVALMPILSS AKILGSNETL SAGNVVYSDN GQYHLAMQTD GNLVVYGPTG
AVWQSQTSGS GGNRAVMQGD GNLVIYRADN TAAWSSKTAH PGAFLAVQDD GNVVIYWPRP
AWASNTSDPA TQQSAESKYL ASGSTMSAGQ TVTVAQYMLV FQADGNLVLY KNGGNPIWST
GTQGKGATYA VMQSDGNFVI YAGSTALWST KTNGANGAQL VLQSDGNLVI YAPTAAWSTK
FGLVTAPTST STSNNGPGSG ICVGVCPPHP LNGNPFSPVG VGTTGLGFPT PGYPGAAF
|
|---|
| |