| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1559 |
|---|
| Symbol | |
|---|
| ID | 4448961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 1724635 |
|---|
| End bp | 1724973 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639693603 |
|---|
| Product | small multidrug resistance protein |
|---|
| Protein accession | YP_835204 |
|---|
| Protein GI | 116689581 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2076] Membrane transporters of cations and cationic drugs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.219332 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTGC CCGGTTACGC ATGGCTCGCG ATCGCGATCG TCGCGGAAGT GATCGGCACG
TCCGCGCTGC GCGCGGCGGA CGGCTTCACG CGCTTGTGGC CGTCGGTGCT CGTCGTCGCC
GGTTACGGCG TCGCGTTCTA CTGCCTGTCG CTCACGTTGC GCACGATGCC CGTCGGCATC
ATCTATGCAG TCTGGTCGGG CGCCGGCATC GTGCTGATCA CGCTCGTCGC GATGCTGCTC
TATCGCCAGG TGCCGGACGT GCCGGCGGTG ATCGGCCTCG GGCTGATCAT CGCGGGCGTC
GTGGTGCTGA ACCTGTTCTC GAAGATGCAG GCGCACTGA
|
|---|
| Protein sequence | MQLPGYAWLA IAIVAEVIGT SALRAADGFT RLWPSVLVVA GYGVAFYCLS LTLRTMPVGI
IYAVWSGAGI VLITLVAMLL YRQVPDVPAV IGLGLIIAGV VVLNLFSKMQ AH
|
|---|
| |