Gene Bcen2424_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1553 
Symbol 
ID4448954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp1719449 
End bp1720243 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content65% 
IMG OID639693596 
Productextracellular solute-binding protein 
Protein accessionYP_835198 
Protein GI116689575 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTT CGCTGCTGAA GAAGTTGCTG GTTGCCGGCG TGATCGGCAC GTCGTTCGCC 
GCGGCGACCG CGCACGCGGC CGACCTCCTC GACCAGGTCA AGCAACGCGG CACGCTGCGC
GTCGGCCTCG AGGGCACGTT CCCGCCGTTC AACTCGAAGA GCCCGCAAGG CGAGCTCGTC
GGCTTCGACG TCGATATCGC GAAAGCCGTC GCCGCGAAGC TCGGCGTGAA GGCCGAATTC
GTGACGACCG AGTGGAGCGG CATCATCGCG GGCCTGCAGG CCGGCAAGTT CGACGTGATC
GCCAACCAGG TCGGCATCAC CGACAAGCGC AAGGAAACGC TCGACTTCTC GCCGGCGTAC
ACGTACTCGT CCGCGCAGCT CATCCAGCGC AAGGACGACA CGCGCCAGTT CAAGTCGCTG
GAAGACCTGA AGGGCAAGAA GCTCGGCGTC GCGCTCGGCA CGAACTACAT GGACATGGCG
AAATCGGTGC CGGGCATCGA CGTGAAGACG TACCCGGGCG CGCCCGAGTA CCTGCGCGAT
CTCGCGGCCG GCCGCCTCGA CGCGGCGCTC AACGACCGCC TGATGCTCGC GTACCTGACG
AAGAATTCGC AGCTGCCGCT GCGCCCGGGC GCGAACGTCG GTTCGGCGAA CCCGTCCGGC
ATCCCGTTCA AGAAGGGCAA CCCGAAGTTC CAGAAGGCGA TCGACGACGC GATGGCGCAA
CTCGAGGCCG ACGGCACGTT CACGAAGATC TCCGACAAGT GGTTCGGCAT CGACGTGACG
AAACCGATCA AGTAA
 
Protein sequence
MKFSLLKKLL VAGVIGTSFA AATAHAADLL DQVKQRGTLR VGLEGTFPPF NSKSPQGELV 
GFDVDIAKAV AAKLGVKAEF VTTEWSGIIA GLQAGKFDVI ANQVGITDKR KETLDFSPAY
TYSSAQLIQR KDDTRQFKSL EDLKGKKLGV ALGTNYMDMA KSVPGIDVKT YPGAPEYLRD
LAAGRLDAAL NDRLMLAYLT KNSQLPLRPG ANVGSANPSG IPFKKGNPKF QKAIDDAMAQ
LEADGTFTKI SDKWFGIDVT KPIK