Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1545 |
Symbol | |
ID | 4448895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 1709809 |
End bp | 1710798 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639693587 |
Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
Protein accession | YP_835190 |
Protein GI | 116689567 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00485203 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTCGA TGAACCGCCG CGCATTCGCG CGCGCGATGC TGGCCGCGGG CCTCGCTGCC GCCGGTGTCC GCGCGCACGC CGAGAACGCG CCGGCCACGC TGCGCATCGG TTACCAGAAG TCGTCGACGC TGATCACGCT GCTCAAGACG CGCGGCACAC TCGAGCAGGC GCTGACGCCG CTCGGCCTGC GCGTGTCATG GCATGAATTC GCGAGCGGAT TGCCACTGAC CGAAGCGCTC AACGTCGGCG CCGTCGACTT CAGCGCGGAC GTGGCCGATA CGGTGCCGGT CTTCGCGCAG GCCGCGCATG CGCGTTTCGT GTACGTCGCG CAGGAGGCAC CTTCGCCGAA GGCGCAGGCG ATCGTCGTCA AGCAGGACAG CGCGCTGCGC ACGCTCGCCG ATCTCAACGG CCGGCGTATC GCGGTCACGA AGGCGGCCGG TAGCCACTAC CTGCTGCTTG CCGCGCTCGC CCGCGCGAAG CTCGCGCCCG CCGACGTGGC GATCCATTAC CTGACACCCG CGGACGGCCG CGCCGCGTTC GAGCGCGGCA GCGTCGACGC ATGGATCACG TGGGATCCGT ATGTCGCGTC GGTCGACCGG AATCCCGACG TACGGATTCT GGCCGACGGC GACGGACTCG CGTCGTACCA ACGCTACTAC CTCGCGTCGA GCAGTTTCGC CGCCGCGCGC CCCGATGTCA TCCAGATCCT GTTCGACCAA CTGTCGCAGG CCGGCGCTTG GCTACGCGAC CATCCGCAGG AGGCCGCGAA CACGCTCGCG CCGATCTGGG GGCTCGATGC CGCGACGATC GCACGTGCGA ATGCGCGACG CAGCTATCTC GTCCGCGCGG TGGTCACGCA AAACTTCGGT GAACAGCAGA AGATCGCCGA CACGTTCCTT GCGGCCGGGC TGCTGCCCGC CCGCGTCGAT ACGAGCCAGG CGCAGCGCTG GAATTTCACG ACGAAGCGCG CGGAGCCGGT TGGCGCGTGA
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Protein sequence | MTSMNRRAFA RAMLAAGLAA AGVRAHAENA PATLRIGYQK SSTLITLLKT RGTLEQALTP LGLRVSWHEF ASGLPLTEAL NVGAVDFSAD VADTVPVFAQ AAHARFVYVA QEAPSPKAQA IVVKQDSALR TLADLNGRRI AVTKAAGSHY LLLAALARAK LAPADVAIHY LTPADGRAAF ERGSVDAWIT WDPYVASVDR NPDVRILADG DGLASYQRYY LASSSFAAAR PDVIQILFDQ LSQAGAWLRD HPQEAANTLA PIWGLDAATI ARANARRSYL VRAVVTQNFG EQQKIADTFL AAGLLPARVD TSQAQRWNFT TKRAEPVGA
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