Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1536 |
Symbol | |
ID | 4448884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 1698288 |
End bp | 1699508 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639693576 |
Product | major facilitator transporter |
Protein accession | YP_835181 |
Protein GI | 116689558 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00891] putative sialic acid transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTGGA CCCGCGAGCA ACGCAACGTC ACGATCGCCG CCTACCTGGG CTGGACGCTC GATGCGTTCG ATTTTTTCCT GATGGTTTTC GTGCTGAAGG ACATCGCCGC GGAATTCGCG TCGACGATCC CCGCCGTCGC GTTCGCGCTC ACGCTGACGC TCGCGATGCG CCCGCTCGGC GCGCTGATCT TCGGCCGGCT CGCCGACCGC TTCGGCCGCC GCCCGACGCT GATGGTCAAC ATCGCCTGCT ATTCGCTGCT CGAACTCGCG TCGGGTTTCG CGCCGAGCCT GACCGCGCTG CTCGTGCTGC GCGCGCTGTT CGGCATCGCG ATGGGCGGCG AATGGGGCGT CGGCTCCGCG CTGACGATGG AAACCGTGCC GACCCACGCG CGCGGCTTCG TGTCGGGGCT GCTGCAGGCC GGCTACCCGA GCGGCTATCT GCTCGCGTCC GTCGTGTTCG GCCTGTTCTA CCAGACCATC GGCTGGCGCG GGATGTTCAT GGTCGGCGTG CTGCCCGCGC TGCTCGTGCT GTACGTGCGC GCACACGTGC CCGAATCGCC GGCATGGAAA CAGATGGAGA AGCGAGCGCG CCCGAGCCTC GGCGCGACGC TGAAGCAGAA CTGGAAGCTC ACGATCTACG CGATCGTGCT GATGACCGCG TTCAACTTCT TCTCGCACGG CACGCAGGAC CTCTATCCGA CCTTCCTGCG CGAACAGCAC CACTTCGATC CGCATACCGT GTCGTGGATC ACGATCGTGC TGAACATCGG CGCGATCGTC GGCGGCCTGT CGTTCGGCAC GATCTCGGAG CGGATCGGCC GGCGCCGCGC GATCTTCATC GCCGCGCTGA TCGCGCTGCC CGTGCTGCCG CTGTGGGCGT TCTCGAGCGG CCCGGTTGCA CTCGCCGCCG GCGCGTTCCT GATGCAGATC TCGGTACAGG GCGCGTGGGG CGTGATACCG GTTCACCTGA ACGAGATCTC GCCCGACGAG ATCCGTGCGA CCTTCCCCGG CGTCGTCTAC CAGCTCGGCA ACCTGCTCGC GTCGGGCAAC GCGACGATGC AGGCGTCGCT GGCCGTGTCG AACCACGACA ATTACGGCTT CGCGCTCGCG CTCGTGGCCG GTATCGTGGC CGTCGCGATC GCCGTGCTGA TCCTGTTCAG CCGCGAACGG CGCGGCATCG ACATGACGCA ATCGGTCAAT ACGCGTAGCA CCGTCGGGTG A
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Protein sequence | MSWTREQRNV TIAAYLGWTL DAFDFFLMVF VLKDIAAEFA STIPAVAFAL TLTLAMRPLG ALIFGRLADR FGRRPTLMVN IACYSLLELA SGFAPSLTAL LVLRALFGIA MGGEWGVGSA LTMETVPTHA RGFVSGLLQA GYPSGYLLAS VVFGLFYQTI GWRGMFMVGV LPALLVLYVR AHVPESPAWK QMEKRARPSL GATLKQNWKL TIYAIVLMTA FNFFSHGTQD LYPTFLREQH HFDPHTVSWI TIVLNIGAIV GGLSFGTISE RIGRRRAIFI AALIALPVLP LWAFSSGPVA LAAGAFLMQI SVQGAWGVIP VHLNEISPDE IRATFPGVVY QLGNLLASGN ATMQASLAVS NHDNYGFALA LVAGIVAVAI AVLILFSRER RGIDMTQSVN TRSTVG
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