| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1525 |
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| Symbol | |
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| ID | 4448803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 1686927 |
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| End bp | 1687925 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639693565 |
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| Product | type II secretion system protein |
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| Protein accession | YP_835170 |
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| Protein GI | 116689547 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.623315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCAA ACCGTTTAGG CGCGCTTGCG CTGGTGCTCG GATCGGTCGG CGTGCTGCTG
CTTGCCGCGC TCGCGATCGT TCGCATCGTG CTCGTGCAGC GTGCCGAGCG CGCGCTGTTG
CATGCGCTCG ACCGCCGGGC CGCCGCAGTC GAAGCGGCTG CCGCGCGTGC CGGCTCCGCC
GACGCGGCGC GCGAGGCAGC GGCACCTGTC GCGCCGCGGG TTCGCTTCGC GAGGCTGCGC
GAACGTTTCG AAGACGTCGG GATGCGGTGG CTCGATACCG GTTTCAGCCG ATATCTGATC
GCCGACGAAG ACCGTCGATT GCTCGAGCAG TGCGGTTTCG TCGACGTGCG CGCCAGAGCG
CTGTTCGTCG GCGCGCGCAT CGTCTGCGCG ATCCTGCTGC CGGCGCTGGC CGTGCTGGTA
CTGATCGGCC GCGGACAGCA AGCGCGCTGG CCGTTGTGGC TCTCCATTGC GCTCGTGACC
GGCTACATGC TGCCGAAAAT CTACGTGCGG CGGCGCGCGA CCGCGCGTCG ACAGAGCCTT
GCGGCCGAAC TGCCGCTGCT CGTCGATATG TTGCGGCTGC TGCAGGGCGT CGGCCTGTCG
CTCGACCAGA GCATCCAGGT GGTCACACAC GATTTTCAGA CGATGTTGCC GGTGCTGTCG
TGGGAGCTCG GCGTCGCGCA GCGGCAGTTC GCGGCCGGAC GTACGCGCGA GCAATCGCTG
CAGCGCCTCA CGAACAGTTT CGACAACGAG GATCTGCGCG CGATCGTGCG CTTGCTGATT
CAGGTCGACA AGCATGGCGG CGCGGTGCAG GAGCCGCTGA AGCAATTCGG CGACCGTCTG
CGTGAAGGGC GTCGCGCGAC GCTGCGCGAG CAGATCGGCC GCCTGACGGT GAAGATGACC
GGCGTGATGA TCGTCACGCT GTTGCCGGCA TTGTTGATCG TGACCGCGGG GCCGGGGATC
ATGACCGTGC TGTCCGCGCT CGCTGCGTTT CAGCGCTGA
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| Protein sequence | MDANRLGALA LVLGSVGVLL LAALAIVRIV LVQRAERALL HALDRRAAAV EAAAARAGSA
DAAREAAAPV APRVRFARLR ERFEDVGMRW LDTGFSRYLI ADEDRRLLEQ CGFVDVRARA
LFVGARIVCA ILLPALAVLV LIGRGQQARW PLWLSIALVT GYMLPKIYVR RRATARRQSL
AAELPLLVDM LRLLQGVGLS LDQSIQVVTH DFQTMLPVLS WELGVAQRQF AAGRTREQSL
QRLTNSFDNE DLRAIVRLLI QVDKHGGAVQ EPLKQFGDRL REGRRATLRE QIGRLTVKMT
GVMIVTLLPA LLIVTAGPGI MTVLSALAAF QR
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