Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1518 |
Symbol | |
ID | 4448796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 1679939 |
End bp | 1680433 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639693558 |
Product | peptidase A24A, prepilin type IV |
Protein accession | YP_835163 |
Protein GI | 116689540 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000000376133 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCTGC TAACTGGCGT CGGGGTTTTC CTCGCGTGGG CGGTGCTCGT CGCGCTCGAG GACATCCGTC ATAGGCGTAT ACCGAATTCA CTGGTGATCG GTGGATTCGT ATCTGCATTT GTGCTCGCCG GGCATAGTCC ATTCGGCATA TCCGTGAATC AGGCGCTCAT TGGCGTACTG ATCGGCTTTC TCAGCCTTTT CCCGTTTTTT GTGCTGCGCG TAATGGGTGC CGCGGATGTC AAGGTATTCG CGGTGCTGGG CGCGTGGTGC GGCCCGCATG CGCTGCTGTG GCTCTGGATC ATTGCGAGCC TGCTGGCATT CGCGCATGCC GGCACGCTGG TTTTCGCCAC CCGTACGCCG GTGTCGGCAT TGTGGCAGCG GCGTTCGCCG ACGATGCAGA TCGCCGGTTT CCGGGCGTCG CCGTATGCCG CGTTTCTCGT GATTCCCGCG GCGCTGTGGT GCCTGTACCG GATCGCGACG GGGGGAATGC AATGA
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Protein sequence | MILLTGVGVF LAWAVLVALE DIRHRRIPNS LVIGGFVSAF VLAGHSPFGI SVNQALIGVL IGFLSLFPFF VLRVMGAADV KVFAVLGAWC GPHALLWLWI IASLLAFAHA GTLVFATRTP VSALWQRRSP TMQIAGFRAS PYAAFLVIPA ALWCLYRIAT GGMQ
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