| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1514 |
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| Symbol | |
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| ID | 4448792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 1674021 |
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| End bp | 1675706 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639693554 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_835159 |
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| Protein GI | 116689536 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.343998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCCA GACTCGACAG ATGGATGATG CTGCTCGCCA TCGCGGCGGC AGGCACGGCA
CAGGCACAAA CGCGCGTCGG CGGTAACCCG CTCGACTCCC TTCCCCAGAT CAACGCACCG
AAGACGGGCC CGAACGTCAC CGTTCAGGTC GCGCCGCAGG CGCCGCAATT GCAGGAGCTG
CTGTCGCGGC ACCTGACGCC GAAGACGTTC CAGGTCGAAG GTGTGAAGTC GGTACCGTTC
GAGGAAATCA CGCGCCGCTT CACACCGCTC GTCGGCAAGG ACATCACGAT CGGCGAGTTG
ATCGAAACCG CCAACGGCGT GACGAAGCTG TACCAGGAGC GCGGCTACGC GCTGTCGTTC
GCGTTCGTTC CCGCGCAGAC GTTCGAGGAC GGTGTCGTGC GCATCACGGT GGTCGAAGGC
TATGTGTCGG ACGTCAAGGT CACCGGCAAA CCCGGCGCGA TGGAACCGAA GATTCGCGCG
ATTGCCGCGC ACATCACGGC CGACCGACCG CTGCGCCGCG CGACGTTCGA GCGCTACGTG
AACACGTTCG GCCTGCTGCC CGGCCTCACG GTGAAGGCGA ATGTCCCGCC GCCGCAAACC
ACCGACGGCG CGACGACGCT CGAGCTCGCG GTCGACCGCA AGCCGTTCAA TGTCAGCACG
GGGATCGACT TCAACCACCC GGGCGTCCAG GGCCTCATCA CCGCGACCGA AAACGGCCTG
ACGCGGTTCG GCGAGCAACT GAGCATCTCG GCGCTCGCGC CGCCGGGACG CGACAAGCAA
ACCTACTTCG CGTTCAGCGG CGCCCTGCCC GTCGGCAGCA GCGGCCTGAT CACGCGACTC
GATGCCAGCA CGTATCGCGG CAAGCCGACC GACAACCCGG GGTTGCCGTC GTACGTCGAG
CGGACGGTCA AGAACGAAAA ACTCGGTCTT TCGGCCTCCT ATCCGATCCT GTTGAACAAT
CAGCGCAGCC TGCTCGGCAC CGTGTCGGGC TATGCGTCGC ACAACGAGGA CCGCTACCAG
AACCAGATCA ACGGTGCGAG CCTCGATACG CGTTCGCAGG TTCGCGTGCT GCAGATGCAG
CTCGACTACA CGAGCGTCCA GCCGAAACAG GTACAGAAGC TGAGCGTCAA CGTCGCGAAG
GGGTTCAATA TCCTCGGCGC GTCGAAAGCG CAGGACATTA CCGTCGGTAC GACGACGACC
TCGGTGGATA GCCCGATCTC GCTGACCTTC GTTCGCACCG GCGCGACCTT CACGCAGACG
AACGAATGGC CGTTCCGGAT CGGCACGTCG GTTTCGGTGA CCGGGCAATA CAGTCCCGAC
TCGCTGCCGA CGTCCGAGCA GATCTCGTTC GGCTCGACCC GTTACGCGCT CGGCTACCAG
CCGGGCGAAA CGTCGGGCGA CTCGGGCTGG GGGATGTCAC TGGAAGTCAA CCGCGGCTTC
ACGCCGGGCT GGACGTATCT GAAATCGATC ATGCCGTACA TCGCATACGA CATGGCGCGC
GTGTATTTGC ACTCGGGCAC GCCGTCACCG AACCGCATGT CGTCGGTCGG CATCGGCGTG
CGGCTCACGG ACAGCCGCTA CTACAGTCTC GACCTGAACG TCGCCAAACC GGTAGGCGAT
GCACCGGTCG AAAGCGCGTC ACGCAGCCCA CGCATCAACG CCGCGTTCTC CTATCAGCTC
AACTGA
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| Protein sequence | MKSRLDRWMM LLAIAAAGTA QAQTRVGGNP LDSLPQINAP KTGPNVTVQV APQAPQLQEL
LSRHLTPKTF QVEGVKSVPF EEITRRFTPL VGKDITIGEL IETANGVTKL YQERGYALSF
AFVPAQTFED GVVRITVVEG YVSDVKVTGK PGAMEPKIRA IAAHITADRP LRRATFERYV
NTFGLLPGLT VKANVPPPQT TDGATTLELA VDRKPFNVST GIDFNHPGVQ GLITATENGL
TRFGEQLSIS ALAPPGRDKQ TYFAFSGALP VGSSGLITRL DASTYRGKPT DNPGLPSYVE
RTVKNEKLGL SASYPILLNN QRSLLGTVSG YASHNEDRYQ NQINGASLDT RSQVRVLQMQ
LDYTSVQPKQ VQKLSVNVAK GFNILGASKA QDITVGTTTT SVDSPISLTF VRTGATFTQT
NEWPFRIGTS VSVTGQYSPD SLPTSEQISF GSTRYALGYQ PGETSGDSGW GMSLEVNRGF
TPGWTYLKSI MPYIAYDMAR VYLHSGTPSP NRMSSVGIGV RLTDSRYYSL DLNVAKPVGD
APVESASRSP RINAAFSYQL N
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