Gene Bcen2424_1475 details

Gene Information

• Locus tag: Bcen2424_1475
• Symbol: thrS
• ID: 4448177
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia HI2424
• Kingdom: Bacteria
• Replicon accession: NC_008542
• Strand: +
• Start bp: 1628792
• End bp: 1630699
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 639693514
• Product: threonyl-tRNA synthetase
• Protein accession: YP_835120
• Protein GI: 162227933
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.0274744
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTTCGA TACGCTTGCC TGACGGCTCA GTTCGACAAT ACGAGCATCC GGTGACAGTT 
GCCGAGGTTG CGGCCTCGAT CGGTCCCGGC CTTGCGAAGG CTGCGCTTGG TGGCAAGCTC 
GATGGCGAGC TCGTTGATAC GTCGACGGTG ATCGACCGCG ACGCGTCGCT CGCGATCGTC 
ACGGACAAGG ATGCCGACGG CCTCGACATC ATCCGCCACT CGACCGCCCA CTTGCTCGCG 
TATGCGGTGA AGGAGCTGTA TCCGGACGCG CAGGTGACGA TCGGCCCGGT GATCGACAAC 
GGTTTCTATT ACGACTTCTC GTACAACCGC CCGTTTACGC CGGAAGATCT GGAAAAGATC 
GAAAAGCGCA TGCAGGAACT CGCGAAGAAG GACGAGCCGG TCACGCGCCG TGTCGTGTCG 
CGTGACGAAG CGGCCGGTTA CTTCCGCAGC ATCGGCGAGA AGTACAAGGC GGAGATCATC 
GAATCGATTC CGCAAAGCGA CGAAATCAAG CTGTACTCGC ACGGCGGCTT CACCGATCTG 
TGCCGCGGCC CGCACGTGCC GTCCACCGGC AAGCTGAAGG TCTTCAAGCT GATGAAGGTC 
GCGGGTGCGT ACTGGCGCGG CGATTCGAAG AACGAGCAGC TGCAGCGTAT CTACGGCACG 
GCCTGGACGA AGAAGGAAGA CCAGGATCAG TACCTGCACA TGCTCGAGGA GGCGGAGAAG 
CGCGACCACC GCAAGCTGGG CAAGCAGCTC GACCTGTTCC ACATGCAGGA AGAGTCGCCG 
GGCATGGTGT TCTGGCATCC GAAGGGCTGG GCGCTGTGGC AGCAGGTCGA GCAGTACATG 
CGCCGCCGCG TCAACGAAGC CGGTTATCTC GAGATCAAGA CGCCGATGAT CATGGACCGC 
TCGCTGTGGG AAGCGTCGGG CCACTGGCAG AACTATCGCG AGAACATGTT CACGACGGAG 
TCGGAGAAGC GCGACTACGC GATCAAGCCG ATGAACTGCC CGGGCCACGT CCAGGTGTTC 
AAGCACGGCC TGCGCTCGTA TCGCGATCTG CCGCTGCGTT ACGCGGAATT CGGCTCGTGC 
CACCGCAACG AGGCATCGGG CGCGCTGCAC GGCCTGATGC GCGTGCGCGG CTTCGTGCAG 
GACGATGCGC ACATCTTCTG TACGGAAGAC CAATTCATCT CGGAATCGAT CGCGTTTAAC 
ACGCTGGCCA TGAGCGTGTA CAAGGACTTC GGTTTCGATC ACATCGACAT CAAGTTGTCG 
CTGCGTCCCG ACCAGCGTGC GGGTACGGAC GAGACGTGGG ATCGTGCCGA GCAGGGTTTG 
CGCGATGCAC TGACGGCCTG CGGCCTTACG TGGGAAGAAT TGCCGGGTGA GGGCGCGTTC 
TACGGTCCGA AGATCGAGTA CCACATCAAG GATGCGCTCG GCCGCTCGTG GCAGTGCGGC 
ACGCTGCAGC TCGACATGGT GTTGCCGGAG CGCCTGGGGG CCGAGTACGT CGCGGAAGAC 
AACAGCCGCC GCCGGCCGGT GATGCTGCAC CGCGCGATCG TCGGTTCGAT GGAGCGATTC 
CTCGGCATTT TGATCGAGCA CCATGCTGGT GCAATGCCGG TTTGGCTCGC GCCGTACCAG 
GCAATTGTGC TCAATATCGC CGAAAGTCAG GCCGAATATG CGCAGTCTCT GACCCAAACG 
TTGCAAAAAC AAGGGGTTAG AGTGGCGGCC GATTTGCGCA ACGAGAAGAT TAGCTATAAA 
ATACGCGAGC ACACGCTGGA AAAGGTGCCT TATCTCCTCG TCGTGGGCGA TAAGGAGCGT 
GATGCGCAAA CGGTAGCCGT GCGTGCCCGT GGCGGCGTCG ATCTTGGCGT AATGCCGGTC 
GAAGCCTTCG TTGAGCGTCT GCAGGAAGAC CTGCGCTCGT TCAAGTAA 

 

Protein sequence

MVSIRLPDGS VRQYEHPVTV AEVAASIGPG LAKAALGGKL DGELVDTSTV IDRDASLAIV 
TDKDADGLDI IRHSTAHLLA YAVKELYPDA QVTIGPVIDN GFYYDFSYNR PFTPEDLEKI 
EKRMQELAKK DEPVTRRVVS RDEAAGYFRS IGEKYKAEII ESIPQSDEIK LYSHGGFTDL 
CRGPHVPSTG KLKVFKLMKV AGAYWRGDSK NEQLQRIYGT AWTKKEDQDQ YLHMLEEAEK 
RDHRKLGKQL DLFHMQEESP GMVFWHPKGW ALWQQVEQYM RRRVNEAGYL EIKTPMIMDR 
SLWEASGHWQ NYRENMFTTE SEKRDYAIKP MNCPGHVQVF KHGLRSYRDL PLRYAEFGSC 
HRNEASGALH GLMRVRGFVQ DDAHIFCTED QFISESIAFN TLAMSVYKDF GFDHIDIKLS 
LRPDQRAGTD ETWDRAEQGL RDALTACGLT WEELPGEGAF YGPKIEYHIK DALGRSWQCG 
TLQLDMVLPE RLGAEYVAED NSRRRPVMLH RAIVGSMERF LGILIEHHAG AMPVWLAPYQ 
AIVLNIAESQ AEYAQSLTQT LQKQGVRVAA DLRNEKISYK IREHTLEKVP YLLVVGDKER 
DAQTVAVRAR GGVDLGVMPV EAFVERLQED LRSFK