| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1473 |
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| Symbol | |
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| ID | 4448174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 1626121 |
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| End bp | 1628358 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639693511 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_835118 |
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| Protein GI | 116689495 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0014242 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAT CCGTTTCCGC CTCTCCCGTC GCGGCGCCGT CGTTCGACGA CGTGCTCGCG
TTCGTGCGCG AGCGGGCCGG CGACGCGCGC CTGTCGTCCG GCGAGCTGCT CGCCGATCAC
TCGGCGGGCA CGGCGGCGAT CATGCGCACG CTGAACGTCG ATCCGCACGC GATGCAGGCC
GCCGCGCTGT TCGTGCTGAC GCCGCACCTG AGCGACCCCG AGCGCGAGCT GACCGAGCGT
TTCGGCGACG AAGTCGCGCG GCTCGTGTCC GACGTGCGCA AGCTGTTGCG GCTCGGCACC
GTCAGCCTGC GCGCCGCGCA GAATGCCGCG AAGCCCGACT CCGGGCGCGA CGCGGCGGAA
GAGCGGCGCA CGCAAATCGA GGCGCTGCGC AAGATGCTGC TCGCCTTCGC GCAGGACATC
CGCGTGGTGC TGATCCGGCT CGCGTCGCGG TTGCAGTCGC TGCGCTACTA CGCGGCCGCG
AAGCTCGATC CGCCGCCCGA CGTCGCGCGC GAGACGCTGG AGATCTATGC GCCGCTCGCG
AACCGTCTCG GCATCTGGCA ACTGAAGTGG GAGCTCGAGG ATCTCGCGTT CCGCTTCGAG
GATCCCGTCA CCTACAAGCG GATCGCGAAG CTGCTCGACG AGAAGCGCAT CGAGCGCGAG
GCGTACGTCA CGCAGGCGAT CGCGCGGCTG CAGCACGAGC TCGCGCAAGC GCACATCCAG
GCCGACGTGA GCGGCCGGCC GAAGCATATC TACAGCATCT GGCGCAAGAT GCGCGGCAAG
GAGCTCGACT TCTCCGAGCT GTACGACGTG CGCGCGTTTC GCGTGATCGT GCCCGACATC
AAGGATTGCT ACGCGGTGCT GGGCATCGTG CATCACCTGT GGCAGCCGGT GCCGAAGGAA
TTCGACGACT ACATCTCGCG GCCGAAGCCG AACGGCTACA AGTCGCTGCA TACGGTCGTG
ATCGGCGACG ACGGCCGTGC GTTCGAAGTG CAGATCCGCA CGCAGGAGAT GCATCGTTTC
GCCGAGTACG GCGTCGCCGC GCACTGGCGC TACAAGGAGG CCGGCGCGCG CGGCTACGGC
GGCCAGTTCT CCGCGAGCGA CAAGTACGAC GAGAAGATCG CGTGGCTGCG CCAGTTGCTC
GCGTGGAAGG ACGACGTCGA GGACGGCACC GAAGTGTCGG GCGACCAGGC GTGGGCGCAA
TTGCGCGAGA CGTCGCTCGA CGACGACCAC ATCTATGTAC TGACGCCGCA GGCGCGCGTG
ATCGCGTTGC CGCAGGGCGC GACGCCGGTC GATTTCGCGT ATCACCTGCA TAGCGAGCTC
GGCCATCGCT GCCGTGGCGC GCGCGTCGAC GGCGTGATGG TGCCGCTGAA CACGTCGCTG
GCGAACGGCC AGACGGTCGA GATCGTCGCG GTGAAGGAAG GCGGGCCGTC GCGCGACTGG
CTGAACCTGC AGCTCGGTTA CCTGAAGAGC TCGCGCGCGC GGCAGAAGGT GCGTGCGTGG
TTCAACTCGA TCGAGCAGGA AGAAAACGTC GCGCACGGGC GCGCGCTCGT CGAAAAGACG
CTGCAGCGCG AGGGCAAGAC GTCGGTCAAC CTGGACAACC TCGCCGCGAA GCTCGGCTTC
AAGTCGCCCG AGGAGTTGTT CTCGGTCGTC GGCAAGGAAG AATTCAGCCT GCGCAACGTC
GAGCACGCGC TGTCCGATGC GCCGCCGCCG GAACCGGCGC CCGAGGCGCC GGCCGATTTC
GAGAAGCGCA GCAGCGGCGC GAGCGTCGCG CACGGCGCGT CGACCGGCGT GCTGGTGGTG
GGCGTCGACG CGCTGCTGAC GCAGTTGGCG CGCTGCTGCC GTCCGGCGCC GCCCGATCCG
ATCAGCGGTT TCGTCACGCG CGGCAAGGGA ATGTCGATTC ATCGCAGCGA CTGCCCGACG
TTTCGCCGGA TGGTCGAGCG CGCGCCGGAG CGCGTGCTGC AGACGACCTG GTCGGCCGAC
GTGCTGGGCG GGCGCGGCGC GTCCGTGTAT CCGGTCGACC TGATGATCGA GGCGAGCGAC
CGGCAAGGGT TGCTGCGCGA TATCTCCGAA GTGTTCGCAC GCGAAAAGAT CAATGTCGTG
GGCGTGAAGA CGCAGAGTCG CCGCAATGCG GCATTCATGC AGTTCACGGT CGAGGTATCG
AATTCGGCGC AGGTGCAGCG CGCGTGCACG CTGCTCGGCG AGGTGCAGGG CGTCGTGCGG
GCAGGGCGGA AATCGTGA
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| Protein sequence | MTESVSASPV AAPSFDDVLA FVRERAGDAR LSSGELLADH SAGTAAIMRT LNVDPHAMQA
AALFVLTPHL SDPERELTER FGDEVARLVS DVRKLLRLGT VSLRAAQNAA KPDSGRDAAE
ERRTQIEALR KMLLAFAQDI RVVLIRLASR LQSLRYYAAA KLDPPPDVAR ETLEIYAPLA
NRLGIWQLKW ELEDLAFRFE DPVTYKRIAK LLDEKRIERE AYVTQAIARL QHELAQAHIQ
ADVSGRPKHI YSIWRKMRGK ELDFSELYDV RAFRVIVPDI KDCYAVLGIV HHLWQPVPKE
FDDYISRPKP NGYKSLHTVV IGDDGRAFEV QIRTQEMHRF AEYGVAAHWR YKEAGARGYG
GQFSASDKYD EKIAWLRQLL AWKDDVEDGT EVSGDQAWAQ LRETSLDDDH IYVLTPQARV
IALPQGATPV DFAYHLHSEL GHRCRGARVD GVMVPLNTSL ANGQTVEIVA VKEGGPSRDW
LNLQLGYLKS SRARQKVRAW FNSIEQEENV AHGRALVEKT LQREGKTSVN LDNLAAKLGF
KSPEELFSVV GKEEFSLRNV EHALSDAPPP EPAPEAPADF EKRSSGASVA HGASTGVLVV
GVDALLTQLA RCCRPAPPDP ISGFVTRGKG MSIHRSDCPT FRRMVERAPE RVLQTTWSAD
VLGGRGASVY PVDLMIEASD RQGLLRDISE VFAREKINVV GVKTQSRRNA AFMQFTVEVS
NSAQVQRACT LLGEVQGVVR AGRKS
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