| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1469 |
|---|
| Symbol | |
|---|
| ID | 4448170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 1623024 |
|---|
| End bp | 1623581 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639693507 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_835114 |
|---|
| Protein GI | 116689491 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5485] Predicted ester cyclase |
|---|
| TIGRFAM ID | [TIGR02096] conserved hypothetical protein, steroid delta-isomerase-related |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATCC GCCTTCGTTC AGCCGCCCGC CCTGTCGCGC ACGCCTTCGC GGCAGCCGCT
TGCGTCGTAG CGCTCTGGCC CGCCGCCGCC CGTGCCGCCG ATCTCGTCGC ACCGCACAGC
CTGACCGTCG CGGCAGGCTT GCCGGCCGCG CAGGCCCGCG CGCAAATCCT GGCCGCGCGC
CGCTACGGCA GCTTCTGGAA TACCGGCGAC CCCGCGCTCG CCCGCGCGGC ACTCGCCGAC
GACTTCACCG ACCGCACGCT GCCGCCCGGC CGCGAACAAG GCGCAGCAGG GCCGCTCGCG
GCGTCCAGCA CGATGCGCGG CGCGATCCCG GACCTGCGCT GCGACATCGA ACAGATGATC
GTCGCCGGCG ACCGGGTCGT CGTGCACCTG CATTTCCGCG GGCATTTCAC CGGGGCGTTC
AACGGAACGG CCGGGCGCGG ACAGGCGATC GACTTCATCG CGACCGATAT CTACCGGATC
GACCACGGCC GGATCGCGGA AAACTGGCAT ATCGAGGACA ACCTGACGCT GATGCGTCAG
CTCGGGCTCG TCGGCTGA
|
|---|
| Protein sequence | MSIRLRSAAR PVAHAFAAAA CVVALWPAAA RAADLVAPHS LTVAAGLPAA QARAQILAAR
RYGSFWNTGD PALARAALAD DFTDRTLPPG REQGAAGPLA ASSTMRGAIP DLRCDIEQMI
VAGDRVVVHL HFRGHFTGAF NGTAGRGQAI DFIATDIYRI DHGRIAENWH IEDNLTLMRQ
LGLVG
|
|---|
| |