| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1465 |
|---|
| Symbol | |
|---|
| ID | 4448381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 1619824 |
|---|
| End bp | 1620528 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639693503 |
|---|
| Product | 3-oxoacid CoA-transferase, A subunit |
|---|
| Protein accession | YP_835110 |
|---|
| Protein GI | 116689487 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAG TCTATCCAAG CGCGGCTGCC GCGCTGGAGG GGATCGTCCG TGACGGACAG
ACCTTCGCGG TGGGCGGCTT CGGCCTGTGC GGGATTCCCG AGGCGCTGAT CGCGGCGTTG
CGCGATTCGG CCGTCAAGGG CATCACCTGC ATCAGCAACA ATGCGGGCGT CGACGGTTTC
GGCCTCGGCC TGCTGCTGGA AACGCGCCAG ATCAAGAAGA TGATCTCGTC GTACGTCGGC
GAGAACAAGG AGTTCGAGCG CCAGTACCTG GCCGGCGAAC TCGAGCTCGA ATTCACGCCG
CAGGGCACGC TCGCCGAAAA GCTGCGCGCG GGCGGCGCGG GCATCCCCGC GTTCTTCACG
AATACCGGCT ACGGCACAGT GATCGCGGAA GGCAAGGAAA CGCGCCAGTT CGGCGATCGC
CACTACGTGC TCGAGCCGTC GCTGACGGCC GACGTCGCGC TCGTCAAGGC GTGGAAGGCC
GACAAGTCCG GCAACCTGAT CTATCGCCGC ACCGCGCGCA ACTTCAACCC GATGTGCGCG
ATGGCCGGCA AGATCACCGT GGTCGAAGTC GAGGAGATCG TCGAGAACGG TACGCTCGAT
CCGGATCAGG TCCATACGCC GGGGATCTTC GTGCAGCGCA TCGTGCTGAA CGCGACGCCC
GAAAAACGCA TCGAACAACG CGTCGTACGC GCGAAAGGAG ACTGA
|
|---|
| Protein sequence | MNKVYPSAAA ALEGIVRDGQ TFAVGGFGLC GIPEALIAAL RDSAVKGITC ISNNAGVDGF
GLGLLLETRQ IKKMISSYVG ENKEFERQYL AGELELEFTP QGTLAEKLRA GGAGIPAFFT
NTGYGTVIAE GKETRQFGDR HYVLEPSLTA DVALVKAWKA DKSGNLIYRR TARNFNPMCA
MAGKITVVEV EEIVENGTLD PDQVHTPGIF VQRIVLNATP EKRIEQRVVR AKGD
|
|---|
| |