| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1449 |
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| Symbol | |
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| ID | 4448365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 1603530 |
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| End bp | 1605047 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639693487 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_835094 |
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| Protein GI | 116689471 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.436796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGGTT GCGCGAGCAT GGGCGACAAC AAAACCCAGT CCACTCGCAT CGAAGCGAAC
GCACTCGACG CCGGCGCGGC CATCCGCGCG GCCGACCGCG ACGCGGGCTG GCCCGCCGCC
GACTGGTGGC GCGCGTACCG CGATCCCCAG CTCGATGCAT GGATCGCCGC CGCCCAGGCC
GGCAACCCGA CCCTCGCGGC CGCCGAGGCC CGCGTGCGCG AAGCGCAGGC GATGGCGCGC
GTCGCCCGCT CGGCCGAACT GCCGCAGATC AACGGCAACC TGTCGCTGAT GCGCCAGCAC
TGGCCGGACA ACGTGTACTA CGGCCCGGGG CCGCTCGCGA ACGCCGATAC CTGGAACAAT
ACCGGCTCGC TCGGCCTGTC GTACCACCTC GATCTGTGGG GCAAGGACAA GAACGCGACC
GAGCGGGCGC TCGACACCGC GCATGCGACC GCCGCCGACG CGCGCGCGGC GAAGCTCGAA
CTCGAAGTCA ACGTGGTGCG CGCGTATGTC GGCATGTCGA TGAACTACGC GCTGCTGGAC
CTCGCGCACG AGACGTTCGA ACGCCAGCGC TCGCTCGCCG ATCTCGCGCG CAAGCGGCTG
CAGGCCGGCC TCGGCACGCA GCTCGACGTG AGCCAGGCGG AATCGACGCT GCCCGACTAC
GAGCGCCAGA TCGACAGCTA CGAAGAGGCG ATCCAGCTCG CGCGCCACCA GCTCGCCGCA
CTGGCCGGCA AGGGCCCGGG CGCCGGCGAC ACCATCAAGC GGCCGCAGCT TGCGCTCGAT
GCGCCGGCCG GCCTGCCGTC GGCGATGCCG GCCGACCTGC TCGGCCGCCG CCCCGACGTC
GTCGCGGCGC GCTGGACGGT CGACGCGCAG GCGCGCGGCA TCGACGTCGC GAAGGCGTCG
TTCTACCCGA ACATCGACCT GCTCGCGACG GTCGGCGGCT TCGGCGTGAC CGCGCCGTTC
ACCGACTTCC TGCGCGCGAT GAACGGCGGC TGGACGGCCG GCCCCGCGCT GTCGCTGCCG
ATCTTCGAAG GCGGCCGGCT GCGGGCGCAG CTCGGCGCCG CGAACGCCGG CTACGACCAG
GCGGTCGAGC GCTACAACCA GACGATCGTC GGTGCGCTCA AGGACATCGC CGACCAGGTC
GTGCGAATCC GCTCGCTCGA TACGCAGAAG AAGGACGCCG CGCGCTCGGT GGCGGCCAAC
AATCGCAGCT ATCAACTGTC GCGCGAAGGC TTCCGCCGCG GGCTGACCGA TTACGTGAAC
GTGCTGGTCG CGCAGCAGCA ACTGCTGCGC GCGCAGGAGA CGGCCGCCCG CATCGACGCC
GAACGCCTCG CCGCGCACGC GCAGCTGATG GCCGCGCTCG GAGGTGGGGT CGAGACGGGT
ACCGATGTGC CAAAGGACGA AGCCGCCACC GCGGTTGCCG CGCCCGCCGC CGCGTCGGGC
ACGAAGCCCG CGGCAGCCGT CGCCCGGCCC GCGGAAGTCG CCACCACCGG CGCGTCCGGC
GTGCCGGCCG CACGGTAA
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| Protein sequence | MAGCASMGDN KTQSTRIEAN ALDAGAAIRA ADRDAGWPAA DWWRAYRDPQ LDAWIAAAQA
GNPTLAAAEA RVREAQAMAR VARSAELPQI NGNLSLMRQH WPDNVYYGPG PLANADTWNN
TGSLGLSYHL DLWGKDKNAT ERALDTAHAT AADARAAKLE LEVNVVRAYV GMSMNYALLD
LAHETFERQR SLADLARKRL QAGLGTQLDV SQAESTLPDY ERQIDSYEEA IQLARHQLAA
LAGKGPGAGD TIKRPQLALD APAGLPSAMP ADLLGRRPDV VAARWTVDAQ ARGIDVAKAS
FYPNIDLLAT VGGFGVTAPF TDFLRAMNGG WTAGPALSLP IFEGGRLRAQ LGAANAGYDQ
AVERYNQTIV GALKDIADQV VRIRSLDTQK KDAARSVAAN NRSYQLSREG FRRGLTDYVN
VLVAQQQLLR AQETAARIDA ERLAAHAQLM AALGGGVETG TDVPKDEAAT AVAAPAAASG
TKPAAAVARP AEVATTGASG VPAAR
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