| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1437 |
|---|
| Symbol | |
|---|
| ID | 4448489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 1585115 |
|---|
| End bp | 1586476 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639693475 |
|---|
| Product | peptidoglycan-binding LysM |
|---|
| Protein accession | YP_835082 |
|---|
| Protein GI | 116689459 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4254] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGACGC GAATCACGCA GCGCACGGTG AACCTGCGCA CGGCGGCGCT GCGCGCGGCC
TGCGCGGTCG CGTTGGCGTT CGCCGCGCAG CAGGCCGCGG CGCAGCCGCC CGCCGCCGCG
GGCAAGACGG TCGTCTATCG CACGCAGGCC GGCGACACGC TGTACGACGT CGCCGCGCGC
TACCTGCAGG GCGCGGACGA CTGGCAACTG CTCCAGCAGA TCAACGGCGT GCCGGCGCCG
AAGCGCCTGC AGCCCGGCAT CGCGCTGAAG CTGCCGGTCG CGCGCCTGCG CAAGGAAAAG
CTCACCGCGC GCGTGATCGC GGTGCAGGGC ACGGCCGAGC GTGCGTCCGG CGCGGCTTTC
GCGCCGCTCG CGAACGATGC GACGCTCGCC GAAGGCGATC GCGTGCGCAC CGGCCCGAAC
GGCTTCGTGA CGATCGAGCT GGCCGACGGC ACGCACATGA GCCTGCCGCC CGACAGCCAG
CTTGACCTGA AATCGCTGCG CCGCACGGTG CTGACCGGCA CGCTCGATCG CGAGTTCGAA
CTCACGCGCG GCTCGGTCGA CAGCGAAGTC ACCCACCTGA AGAAACGCGA CGACCGCTTC
CAGATCCGCT CGCCGTCGGT CGTGGCCGGC GTGCGCGGCA CGCGCTTTCG CGTGAACTAC
GACGCGGCCG GCACGGCGAC GACGCGCGTC GAAGTGCTCG ACGGCACCGT CGGCGTCGCG
GGCGGCCGGC AGTCGGCCGA CGCGACGCTC GTGCATGCGA ATTTCGGCAG CGTCGCGACG
TCGTCCGGCG CGGTCGGCGC GCCCGTCCAG CTGCTGGGCG CCCCCGCGCT CGCGCATCCC
GACAAGGTGC AGGACGAGCC CGACGTCGCA TTCGACGTCA CGCCGCTCGC GCAGGCGCAT
GCGTATCGCG TGCAGCTCGC GCACGATGCG GGGCTGCTCG ACCTGTTCCG CGAAACGCGC
ACCGATTCGC CGCGCGCGGT GTTCCGCGAC GTGCCGAACG GCAACTACTT CGTGCGGATC
GCCGCGATCG ATGCGAACGG CCTCGAGGGG CTGCCGCGCA CCTATGCGTT CGAACGCCGC
GTGATGGGGC TCGACGCGAG CGCGTCGCAG GGCGCGGGCG GTTACGAGTT CCGCTGGTCG
CCGAACGGCT CGGGCAAGAA TGCGCGTTAC CGGTTCGTGT TGTCGCGCTC GAAGGACCTG
AGCGCGCCGG TCGTCGACCA AGTCGGCCTG CACGCGCGCC AGATCACCGT CGCGCACCTG
CCGCCGGGCG ACTATTTCTG GGCCGTGACC GTCGAGGAAT TCGAAGGCGG CAAGTTCTAC
GAGAAGACCA GTCCGGTCAG CGCGTTCACG TTGTCGCGCT GA
|
|---|
| Protein sequence | MTTRITQRTV NLRTAALRAA CAVALAFAAQ QAAAQPPAAA GKTVVYRTQA GDTLYDVAAR
YLQGADDWQL LQQINGVPAP KRLQPGIALK LPVARLRKEK LTARVIAVQG TAERASGAAF
APLANDATLA EGDRVRTGPN GFVTIELADG THMSLPPDSQ LDLKSLRRTV LTGTLDREFE
LTRGSVDSEV THLKKRDDRF QIRSPSVVAG VRGTRFRVNY DAAGTATTRV EVLDGTVGVA
GGRQSADATL VHANFGSVAT SSGAVGAPVQ LLGAPALAHP DKVQDEPDVA FDVTPLAQAH
AYRVQLAHDA GLLDLFRETR TDSPRAVFRD VPNGNYFVRI AAIDANGLEG LPRTYAFERR
VMGLDASASQ GAGGYEFRWS PNGSGKNARY RFVLSRSKDL SAPVVDQVGL HARQITVAHL
PPGDYFWAVT VEEFEGGKFY EKTSPVSAFT LSR
|
|---|
| |