Gene Bcen2424_1422 details

Gene Information

• Locus tag: Bcen2424_1422
• ID: 4450308
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia HI2424
• Kingdom: Bacteria
• Replicon accession: NC_008542
• Strand: -
• Start bp: 1567271
• End bp: 1569154
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639693460
• Product: thiamine pyrophosphate binding domain-containing protein
• Protein accession: YP_835067
• Protein GI: 116689444
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG3962] Acetolactate synthase

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCACCA CCGTAAGACT GACCGTCAGC CAGGCCCTCG TGCGCTACCT GGCCGCCCTG 
CGCGCCGAAG TCGTCCAGCC CGACGGCCGC ACCGAAATCC TGCCGTACTG CGGCGGCGTG 
TTCGCGATCT TCGGCCACGG CAACGTGGCC GGGCTCGGCG AAGCGCTCCA TGCGGAGAAA 
GACCGGCTGC CGACGTTTCG CGCACACAAC GAGCAAGGGA TGGCCAACGC GGCCGTCGCG 
TTCGCGAAAG CGAATTTCCG CCAGCGGATG ATGGCCGCGA CGTCGAGCAT CGGCCCCGGC 
GCCACCAACA TGCTGACCTC CGCCGCGCTC GCGCACGTCG GCCGCTTGCC GCTGCTGCTG 
CTGCCCGGCG ACGTGTTCGT GTCGCGGCTG CCCGACCCGG TGCTGCAGCA GGTCGAGGAT 
TTCGAACAGG GCGACGTCAG CGCGAACGAC TGCTTCCGGC CCGTGACGCG CTACTTCGAC 
CGCATCACGT CGCCGGAGCA ACTGCTCGTC GCGCTGCCGC GCGCGATCCA GGTGATGACC 
GATCCCGCAC AATGCGGGCC CGTGTGTCTC GCGCTGCCGC AGGACGTGCA GACGTTCGCG 
TACGACTGGC CCGAGGATTT CTTCGCGCCG CCGCTGATCC GGATGCGCCG GCCGCCGGCC 
GACGCGCTCG AACTCGCCGA TGCGCTCGAC GTGCTGAAGG CCGCGAAGAA GCCGCTGATC 
GTCGCCGGCG GCGGCGTGCT GTACAGCCAG GCGTGGGATG CGCTGCGCAC GTTCGCCGAT 
ACGCACGGCG TGCCGGTCGC CGAATCGCAG GCCGGCAAGG GCAGCCTCGC GTGGGATCAC 
CCGCTGAACC TCGGCGCGAT CGGCGTGACG GGCTCGCCCG CCGCGAACCG CGCGGCCGCG 
CAGGCCGACG TCGTGTTCGC GGTCGGCACG CGGCTGCAGG ATTTCACGAC CGGCTCGCAC 
GCGCTCTACG GCGACGCGAC GCTGCTGAGC CTGAACGTGC AGCCGTTCGA CGCGGGCAAG 
AAACGCGGCC GGCAACTGGT GGCCGATGCG CGCACCGGCC TCGGGCAACT GTCGGCCGCG 
CTCGCCGGCT GGCGCGCCGA TCCGGCGTGG ACCGCCGCGA ACCGCGACCA GGCCGCCGCG 
TGGAACGCGC GCGTGACGGA CCTGACCACG CGGATTCCGA AGGACACGCT GCCGTACGAC 
GCCGAAGTGA TCGGCGCGGT GCGCGACTCC GCGGCCGACG CGGGGCGCGA CAGCGCGCGC 
GACGATCTCG TCGTCTGCGC GGCCGGCACG CTGCCGGCCG AACTGCACAA GCTGTGGCGC 
AGCGGCGTAC CGGGCAACTA TCACATGGAC TATGCGTATT CGTGCATGGG CTACGAAGTC 
GCGGGCGGCC TCGGCGCGAA GCTCGCGCGA CCCGAGCGCG AAGTGATCGT GATCGTCGGC 
GACGGCTCGT ACATGATGCT CAACGCGGAA CTCGCGACCT CCGTGATGCT CGGCCGCAAG 
ATCATCGTCG TGATCCTCGA CAACCGCGGC TACGGCTGCA TCGAGCGGCT GCAACTCAAT 
TGCGGCGGCG CGAGCTTCAA CAACATGCTC GACGACTGCG TGCCCGAAGG CGGCGAACGC 
TCGACGATCG ACTTCGCGAT GCATGCGCGC GCGATGGGCG CCGAAGCCGT GCACGTGCGC 
GACGTCGGCG AGCTGCGCCA CGAAATGAAG CGCGCGCGTG CGGCGACGAC CAGCCAGGTG 
CTCGTGATCG ACACCACGCA CCAGCGCACG ACCGACGACG GCGGCGCGTG GTGGGAAGTC 
GCGGTGCCGC AGGTGTCCGA ACGCGCCGGC GTCGTGGACG CACACCGCGC GTATCTCGAC 
GCGAAAACCC GCCAGCGGCG CTGA 

 

Protein sequence

MTTTVRLTVS QALVRYLAAL RAEVVQPDGR TEILPYCGGV FAIFGHGNVA GLGEALHAEK 
DRLPTFRAHN EQGMANAAVA FAKANFRQRM MAATSSIGPG ATNMLTSAAL AHVGRLPLLL 
LPGDVFVSRL PDPVLQQVED FEQGDVSAND CFRPVTRYFD RITSPEQLLV ALPRAIQVMT 
DPAQCGPVCL ALPQDVQTFA YDWPEDFFAP PLIRMRRPPA DALELADALD VLKAAKKPLI 
VAGGGVLYSQ AWDALRTFAD THGVPVAESQ AGKGSLAWDH PLNLGAIGVT GSPAANRAAA 
QADVVFAVGT RLQDFTTGSH ALYGDATLLS LNVQPFDAGK KRGRQLVADA RTGLGQLSAA 
LAGWRADPAW TAANRDQAAA WNARVTDLTT RIPKDTLPYD AEVIGAVRDS AADAGRDSAR 
DDLVVCAAGT LPAELHKLWR SGVPGNYHMD YAYSCMGYEV AGGLGAKLAR PEREVIVIVG 
DGSYMMLNAE LATSVMLGRK IIVVILDNRG YGCIERLQLN CGGASFNNML DDCVPEGGER 
STIDFAMHAR AMGAEAVHVR DVGELRHEMK RARAATTSQV LVIDTTHQRT TDDGGAWWEV 
AVPQVSERAG VVDAHRAYLD AKTRQRR