| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1416 |
|---|
| Symbol | |
|---|
| ID | 4450302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 1562355 |
|---|
| End bp | 1563107 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639693454 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_835061 |
|---|
| Protein GI | 116689438 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.908871 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGCA ACGCGATCGC GCTGCACGGC GTGGTGCAGC GCTTCGGCGC GCAGACCGTG
CTCGACGGCG TCGATCTGAG CATCGCGGCC GGTGAGCGCC ACGCGCTGAT CGGGCCGAAC
GGCGCGGGCA AGTCGACGCT GTTCGGCGTG ATCGCCGGGG CGACGCGTCC GACGCGCGGG
CGCGTCATGC TGCACGGCGT CGAGCTGCGC GGGCGCGGGC CGGTCGTCGC GAGCCGCCTC
GGCATCGGCC GCAGTTTCCA GCAGACGAGC GCATTCGCGC GCCTGAGCGT ATTCGACAAC
CTGCGCTGCG CGGCGCTGCA TGCGCCGGCC GAACGGCGGC GCTGGTGGAA CCGGCTGCGC
GAATCCGCGT CGGTCGATCT CGCGGCCGCG CGCGTGCTGC ACGACATCGG CCTCGACGCG
CGGCGCGATA CGCCGGCCGG TGAATTGAGC TACGCGGAGC AACGCGCGCT CGATCTCGGG
ATCGCGCTCG CGAGCGGTGC ACGTACGCTG CTGCTCGACG AGCCGACGGC CGGCATGAGC
CGCGCGCAGG CGGCGCGGAT GATCGCGCTG ATCCGCGCGA CGACGCAGGG CCGCACCGTG
CTGATGATCG AGCACGACAT GGACGCGGTG TTCGGTTTCG CCGAACGCAT CACGGTGCTC
GTGCGCGGCG CGGTGGTCGC GACCGGCGCG CCCGATGCGA TCCGCGCCGA TCCGAGCGTG
CGTGCCGCGT ACCTGGGCGA GGGCGCGGCA TGA
|
|---|
| Protein sequence | MNGNAIALHG VVQRFGAQTV LDGVDLSIAA GERHALIGPN GAGKSTLFGV IAGATRPTRG
RVMLHGVELR GRGPVVASRL GIGRSFQQTS AFARLSVFDN LRCAALHAPA ERRRWWNRLR
ESASVDLAAA RVLHDIGLDA RRDTPAGELS YAEQRALDLG IALASGARTL LLDEPTAGMS
RAQAARMIAL IRATTQGRTV LMIEHDMDAV FGFAERITVL VRGAVVATGA PDAIRADPSV
RAAYLGEGAA
|
|---|
| |