| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1409 |
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| Symbol | alaS |
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| ID | 4450680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 1553801 |
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| End bp | 1556494 |
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| Gene Length | 2694 bp |
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| Protein Length | 897 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639693447 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_835054 |
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| Protein GI | 116689431 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.412076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCCGC GCGCCCCGCC TGGGGCGGCG GCGTTTGAAG CCGTCTTTGC CAGACTGTCC
CCGCACGCCA TGAAAGCTGC CGAAATCCGC GAGAAATTCC TCAAATTCTT CGAATCGAAG
GGCCACACGA TCGTCCGCTC GTCGAGCCTC GTGCCCGGTA ACGACCCCAC GCTGATGTTC
ACGAACTCGG GCATGGTCCA GTTCAAGGAC GTCTTCCTCG GCACGGACCC GCGCCCGTAC
TCGCGCGCCA CGACGGCGCA GCGCAGCGTG CGCGCGGGCG GCAAGCACAA CGACCTCGAG
AACGTCGGCT ACACGGCGCG CCACCACACG TTCTTCGAGA TGCTCGGCAA CTTCTCGTTC
GGCGACTACT TCAAGCACGA CGCGATCAAG TTCGCGTGGG AGCTGCTGAC CACGGTCTAC
CAGCTGCCGA AGGACAAGCT GTGGGTGACC GTCTACCAGG AAGACGACGA GGCCTACGAC
ATCTGGGCGA AGGAAGTCGG CGTGCCGACC GAGCGGATCA TCCGGATCGG CGACAACAAG
GGCGCGCGTT ACGCATCGGA CAACTTCTGG ACGATGGGCG ACACCGGCCC GTGCGGCCCG
TGTACCGAAA TCTTCTACGA CCACGGCCCG GACGTGTGGG GCGGCCCGCC GGGGTCGCCC
GAAGAAGACG GCGACCGCTA CATCGAGATC TGGAACCTCG TGTTCATGCA GTTCAATCGC
GACGCGCAGG GCAACATGAC GCGCCTGCCG AAGCAGTCGG TCGACACCGG CATGGGCCTC
GAGCGTCTCG CCGCGGTGCT GCAGCACGTG CACAGCAACT ACGAGATCGA CCTGTTCCAG
AACCTGATCA AGGCCGCCGC GCGCGTGACC GAGATCAGCG ACCTCACGAA CAACTCGCTG
AAGGTGATCG CCGATCACAT CCGCGCGTGC TCGTTCCTGA TCGTCGACGG CGTGATCCCC
GGCAACGAAG GCCGCGGCTA CGTGCTGCGC CGGATCGTGC GCCGCGCGAT CCGCCACGGC
TACAAGCTGG GCCGCAAGGG CGCGTTCTTC CACAAGCTGG TGGCCGACCT CGTCGCCGAG
ATGGGCACTG CCTATCCGGA GCTGAAGGAA GCCGAACAGC GCGTGACCGA CGTGCTGCGC
CAGGAAGAAG AGCGCTTCTT CGAGACGATC GAGCACGGGA TGTCGATCCT CGAAGCCGCG
CTGGCGGAGG TCGAGGCGAA GGGCGGCAAG GTGCTCGACG GCGAACTCGC GTTCAAGCTG
CACGACACGT ACGGCTTCCC GCTGGACCTG ACGGCCGACG TGTGCCGCGA GCGCGGGATG
ACGGTCGACG AGCCGGCATT CGACGACGCG ATGGCGCGCC AGCGCGAGCA GGCGCGCGCG
GCCGGCAAGT TCAAGGCGAC GCAGGGCCTC GAATACTCGG GCGCGAAGAC CACCTTCCAC
GGTTACGAGG AAATCGCGTT CGACGACGCG AAGGTCGTCG CGCTGTACGT CGACGGCTCG
GCCGTCAACG AGGTGAAGGC CGGCCAGGAC GCGGTCGTCG TGCTCGACCA CACGCCGTTC
TACGCGGAAT CGGGCGGCCA GGTCGGCGAC CAGGGCGTGC TCGCGAACGC CGCGACGCGC
TTCGCGGTGG CCGACACGCT GAAGGTGCAG GCCGACGTGA TCGGCCATCA CGGCACGCTG
GAGCAGGGCA CGCTGAAGGT CGGCGACGTG CTGCGCGCGG AAATCGACGC GCAGCGCCGC
GCCCGCACCC AGCGCAACCA TTCGGCCACC CACCTGATGC ACAAGGCGCT GCGCGAAGTG
CTCGGCGCGC ACGTGCAGCA GAAGGGTTCG CTCGTCGACG CGGACAAGAC CCGGTTCGAC
TTCGCGCACA ACGCACCGAT GACCGACGAC GAAATCCGTC GCGTCGAGCA GATCGTCAAC
AATGAAATCC TCGCCAACGC GCCGGGCATC GTGCGCGTGA TGCCGTACGA CGAAGCGGTG
AAGGGCGGCG CGATGGCGCT GTTCGGCGAG AAGTACGGCG ATGAAGTGCG CGTGCTCGAC
CTCGGCTTCT CGCGCGAACT GTGCGGCGGC ACGCACGTGC ACCGCACCGG CGACATCGGC
CTGTTCAAGA TCGTCGTCGA AGGCGGCGTC GCGGCCGGCA TCCGCCGCGT CGAGGCGATC
ACCGGCGACA ACGCGGTGCG CTACGTGCAG GAGCTCGACG CACGCGTGAA CGAAGCCGCG
GCCGCGCTGA AGGCGCAGCC GTCGGAACTG ACGCAGCGGA TCGCGCAGGT GCAGGAGCAG
GTGAAGTCGC TCGAGAAGGA ACTGGGCGCG CTGAAGTCGA AGCTCGCGTC GAGCCAGGGC
GACGAGCTCG CGCAGCAGGC CGTCGAAGTG GCGGGCGTGT ACGTGCTGGC CGCGACGCTC
GACGGCGCCG ATGCGAAGAC GCTGCGCGAA ACGGTCGACA AGCTGAAGGA CAAGCTGAAG
AGCGCGGCGA TCGTGCTGGC GGCCGTCGAA GGCGGCAAAG TGAGCCTGAT CGCGGGCGTC
ACGCCGGACG CGAGCAAGAA GGTCAAGGCC GGCGAGCTCG TGAACTTCGT CGCGCAGCAA
GTGGGCGGCA AGGGCGGTGG CCGTCCGGAC ATGGCGCAGG CGGGCGGCAC CGAGCCGGCG
AACCTGCCGG GCGCGCTGGC CGGCGTGAAG GGCTGGGTCG AAGAACGGCT CTGA
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| Protein sequence | MPPRAPPGAA AFEAVFARLS PHAMKAAEIR EKFLKFFESK GHTIVRSSSL VPGNDPTLMF
TNSGMVQFKD VFLGTDPRPY SRATTAQRSV RAGGKHNDLE NVGYTARHHT FFEMLGNFSF
GDYFKHDAIK FAWELLTTVY QLPKDKLWVT VYQEDDEAYD IWAKEVGVPT ERIIRIGDNK
GARYASDNFW TMGDTGPCGP CTEIFYDHGP DVWGGPPGSP EEDGDRYIEI WNLVFMQFNR
DAQGNMTRLP KQSVDTGMGL ERLAAVLQHV HSNYEIDLFQ NLIKAAARVT EISDLTNNSL
KVIADHIRAC SFLIVDGVIP GNEGRGYVLR RIVRRAIRHG YKLGRKGAFF HKLVADLVAE
MGTAYPELKE AEQRVTDVLR QEEERFFETI EHGMSILEAA LAEVEAKGGK VLDGELAFKL
HDTYGFPLDL TADVCRERGM TVDEPAFDDA MARQREQARA AGKFKATQGL EYSGAKTTFH
GYEEIAFDDA KVVALYVDGS AVNEVKAGQD AVVVLDHTPF YAESGGQVGD QGVLANAATR
FAVADTLKVQ ADVIGHHGTL EQGTLKVGDV LRAEIDAQRR ARTQRNHSAT HLMHKALREV
LGAHVQQKGS LVDADKTRFD FAHNAPMTDD EIRRVEQIVN NEILANAPGI VRVMPYDEAV
KGGAMALFGE KYGDEVRVLD LGFSRELCGG THVHRTGDIG LFKIVVEGGV AAGIRRVEAI
TGDNAVRYVQ ELDARVNEAA AALKAQPSEL TQRIAQVQEQ VKSLEKELGA LKSKLASSQG
DELAQQAVEV AGVYVLAATL DGADAKTLRE TVDKLKDKLK SAAIVLAAVE GGKVSLIAGV
TPDASKKVKA GELVNFVAQQ VGGKGGGRPD MAQAGGTEPA NLPGALAGVK GWVEERL
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