| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1402 |
|---|
| Symbol | |
|---|
| ID | 4450673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 1546918 |
|---|
| End bp | 1548267 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639693440 |
|---|
| Product | di-haem cytochrome c peroxidase |
|---|
| Protein accession | YP_835047 |
|---|
| Protein GI | 116689424 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1858] Cytochrome c peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACACCC TTCTGAAATC CTTCGCGTCC GCGCGATCGC TGATTCCCGC CGCGGCGACG
CTCGCGGTGG TCGGCGCGCT CGCGGCGCTG GCCGGTTGCG ATGCACAGCC CGGCACGAGT
GCGTCGGCCG CGTCCGTCGT ACCGGCGGCG CAGGCCGCTC CGGCCGCCCC GGCGGTCGCG
CCGGCCAGCC AGCCGCAGAT GCGTGCGCAG GTGTTCGAGG GCGTGAAGCA GATGACGGCG
CTCGGCAAGC AGCTGTTCTT CGATCCGTCG CTGTCCGGGT CCGGCAAGCT CGCTTGCGCG
TCGTGCCACA GCGCCGAACA TGCGTTCGGG CCGCCGAACG CGCTGTCGGT GCAGCTGGGC
GGCGACGACA TGCACCGTAC CGGCTTTCGC GCGGTGCCGT CGCTGAAGTA CCTGCGCGGC
ATCCCGCCGT TCAGCGAGCA CTTCCACGAT TCGCCGGACG AAGGTGACGA AAGCATCGAC
GCAGGGCCGA CCGGCGGGTT GACCTGGGAT GGCCGCGTCG ATACGCGCGA TGCGCAGGCG
CGCATTCCGC TCACGTCGCC GTTCGAGATG AGCAGCTCGC CCGCGCGGGT CGCGAAGGCG
GTTCGCGCCG CGCCGTATGC CGACGCGTTC CGCAAGGCGT TCGGCGACCA GGTGCTCGGC
GACGACCGGG CGACGTTCGA TGCGGTGCTG CGCGCGCTCG ACGCATTCCA GCAGCAGCCG
GCGCTGTTCG ATCCGTACAC GAGCAAATAC GATGCGTATC TGGCCGGCCA CGCGCAGCTC
ACGCCCGCGG AGTTGCACGG CCTGCAGCTG TTCAACGACG AGAAGAAGGG CAACTGCGCG
AGCTGCCACA TCAGCCAGCG CACGCTCGAA GGCGGCCCGC CGCAGTTCAG CGATTTCGGG
CTGATCGCGA TCGCGGTGCC GCGCAACCGC GCGCTGCCGG TCAATCGCGA CCCGCGCTTT
TACGATCTCG GCGCCTGCGG CCCCGAGCGC ACCGACCTGA AGGGCCGCGA CGAATTCTGC
GGGCTGTTCC GCACGCCGTC GCTGCGCAAC GTCGCGCTGC GCAAGACGTT CTTCCACAAC
GGCGTGTATC ACTCGCTCGA GGACGTGATG CGCTTCTACG TCGAACGCGA CATCCATCCG
GAGAAGTTCT ATCCGGTCGT GCATGGCAAG GTGCAGATCT ACGACGATCT GCCGAAGCGC
TACTGGCCGA ACATCAACCG CGAAGCGCCG TTCGACCGCA AGCGCGGCGA CCAGCCGGCG
CTGAACGCGG CCGAGATCAA GGACGTGATC GCGTTCCTCG GCACGCTGAC TGATGGATAT
CAGCAAACGG GTGCGTTAGC CGGACCCTGA
|
|---|
| Protein sequence | MHTLLKSFAS ARSLIPAAAT LAVVGALAAL AGCDAQPGTS ASAASVVPAA QAAPAAPAVA
PASQPQMRAQ VFEGVKQMTA LGKQLFFDPS LSGSGKLACA SCHSAEHAFG PPNALSVQLG
GDDMHRTGFR AVPSLKYLRG IPPFSEHFHD SPDEGDESID AGPTGGLTWD GRVDTRDAQA
RIPLTSPFEM SSSPARVAKA VRAAPYADAF RKAFGDQVLG DDRATFDAVL RALDAFQQQP
ALFDPYTSKY DAYLAGHAQL TPAELHGLQL FNDEKKGNCA SCHISQRTLE GGPPQFSDFG
LIAIAVPRNR ALPVNRDPRF YDLGACGPER TDLKGRDEFC GLFRTPSLRN VALRKTFFHN
GVYHSLEDVM RFYVERDIHP EKFYPVVHGK VQIYDDLPKR YWPNINREAP FDRKRGDQPA
LNAAEIKDVI AFLGTLTDGY QQTGALAGP
|
|---|
| |