Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1380 |
Symbol | |
ID | 4449947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 1520348 |
End bp | 1521577 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639693418 |
Product | endo-1,4-D-glucanase |
Protein accession | YP_835025 |
Protein GI | 116689402 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3405] Endoglucanase Y |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0532451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGCGGG CAATGACGAA GCGACGGGCA ACGCAGCCGG CGCGGCGTGT CGGCGCGACG CTCGCGCTGG CGGTCGCGGT GACGTGCGCG GCGGCCGGCA TGGCCACGCG CGCGCACGCG GCGGCGGCCG GTGCAGCCGA TGCGGCGAGC ACGGGATGCA GCGCGGCGTG GCCGCGCTGG GACGCGTTCA AGCGTGATTT CATCTCGGCC GACGGCCGGG TGATCGACGT CGGCTCGGCC GATTCGCGCA CGGTATCGGA GGGGCAGGCG TATGGACTTT TCTTCGCGCT GGTCGCGAAC GACCGGCGCA TGTTCGACAC GATCCTCGCA TGGACCGAGA ACAACCTCGC GCAGGGCGAC CTGAGCGCGC ACCTGCCGGC GTGGCTGTGG GGCCGTGCGC CCGACGGCGC GTGGCGCGTG CTCGACGCGA ACCCGGCGTC GGACGCCGAC CTGTGGATCG CGTATGCGCT CGTCGAGGCC GGGCGGCTGT GGCACGAGCG CAGCTATACG GCGCGCGGCG CGCTGCTCGC GAAGCGCGTG CTCGACGCCG AGACGGCGAC CGTGCCGGGC CTCGGCCTCA CGCTGCTGCC GGGCCCGACC GGGTTCAAGC TGGCCAACGG CCAATGGCGC GTGAATCCGA GCTATTCGCC GCCGCAGGTG ATTCGCGCGC TCGGCGCACG ACTGCCCGAC GACCGTCGCT GGGCCGCGCT GGCGTCCAGC ACCGCTCGCG TGCTGCTCGA CACCGCGCCG AAGGGCTTTT CGCCCGACTG GGCGCTGTAT CGCGCGGGCA ACGGTTTCGG GCCCGATCCG CAGACCCATG CGGAAAGCGC GTACAACGCG ATCCGCGTGT ACCTGTGGGC CGGCATGCTG GACCGCGCCG ATCCGCTTGC CGCGCCGCTG CTCGCGAAGT TCGCGCCGTT CGCCGACCAT ATCGCCGCGC ACGGCGCGCC GCCGGAGAAG GTCGATACGA CGACGGGCGT CGCGGGGCCG AACGACGGCA ACGGCGGCTT CTCCGCGGCC GCCGTGCCGT TCCTCGACGC ACGCGGCCAG CACGCGCTCG CGGATGCCCA GGCGGCCCGC GTCGATACGC TCGCGCGCCA GTCGGCGCCC GGCTATTACA CGAGCGTGCT GACGCTGTTC GGCCTCGGCT GGCGCGATGG CCGCTACCGG TTCGGGGCGG ACGGCACGCT CGACACCCGC TGGGGAGGCC GTTCGTGCGC CGCCCGCTGA
|
Protein sequence | MARAMTKRRA TQPARRVGAT LALAVAVTCA AAGMATRAHA AAAGAADAAS TGCSAAWPRW DAFKRDFISA DGRVIDVGSA DSRTVSEGQA YGLFFALVAN DRRMFDTILA WTENNLAQGD LSAHLPAWLW GRAPDGAWRV LDANPASDAD LWIAYALVEA GRLWHERSYT ARGALLAKRV LDAETATVPG LGLTLLPGPT GFKLANGQWR VNPSYSPPQV IRALGARLPD DRRWAALASS TARVLLDTAP KGFSPDWALY RAGNGFGPDP QTHAESAYNA IRVYLWAGML DRADPLAAPL LAKFAPFADH IAAHGAPPEK VDTTTGVAGP NDGNGGFSAA AVPFLDARGQ HALADAQAAR VDTLARQSAP GYYTSVLTLF GLGWRDGRYR FGADGTLDTR WGGRSCAAR
|
| |