| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1379 |
|---|
| Symbol | |
|---|
| ID | 4449946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 1517999 |
|---|
| End bp | 1520344 |
|---|
| Gene Length | 2346 bp |
|---|
| Protein Length | 781 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639693417 |
|---|
| Product | cellulose synthase regulator protein |
|---|
| Protein accession | YP_835024 |
|---|
| Protein GI | 116689401 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.409247 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGG CCGTGTCGCT GTTCGTTCTG GCTGCCGCGA TGACCGGCGC TTTCCACACG
GCCGCGCTGT CGGCCGCACC GCTGCCGGCG GTGCCGGCCG CCGCTTCGAC GGCCGCCGCC
GATCACGCAG CGGTGCCGGA TGCCGCGCCA GCGGCGGTGC TCGTGACCGC TCCGGCCACG
CCGGCGGCGG CCAGCGCGCC GACCGCCGGC CTGCCGGCGA CGACCGTACG CATGCCGTTC
GCGTCGCTCG GCGCGTTCGA TCCACTGCGC CTGCGCGGCG CCGACGACGC ACGCACGATC
AACGCCGGCG TGCGGCTCGA CCGCGTGATC ACGGGCGCGC GCTTGCGCCT GACCTACGCG
TATTCGCCGT CGCTGGTCTT TCCGCTGTCG CACCTGAAGG TGTCGGTGAA CGGCGAGGTG
ATCGCGACCG TCCCGTTCGA TGCCGCGCGT GCGGGCCGCA CGGTGACGCA AGAGATCCCG
ATCGATCCGC GCTACTTTTC GGATTTCAAC CAGATCGGCC TGCGCCTGAT CGCGCATTAC
ACGCTCGACC ACTGCGAGGA CCCGACGAAT TCGGCGTTGT GGGCCGACGT GAGCCCGACG
AGCGAACTGA TCCTCGACGA ATCGCCGGTG CGCCTGCCGA ACGATCTCGC GCTGCTGCCC
GCGCCGTTCT TCGACCGGCG CGACAACGGC CGCCTGCGGC TGCCGTTCGT GCTGCCCGCC
ACGCCCGATT CGGCCACCCT GCGCAGCGCG GGCGTGCTCG CGTCGTGGTT CGGCGCGCTG
GCCGACTACC GGCATGCGCG GTTCCCGGTA TCGACCGCGC TGCCGGCCGA CGACCAGGCC
GTCGTGGTCG GCACGGCCGC GACGCTGCCG GCCGGTCTCG CGCTGCCGCC AATCAATGGC
CCGCTGCTCG CGGTCGCGGA CAACCCGTCC GCGCCGGGCC GCAAGCTGCT GGTCGTCACG
GGCCGCACGG CGGCCGAGGT CGACGACGCG GTCGCGACGC TCGTGCTCGG CCGCGCGGCG
CTGTCGGGGC AGGCGGCGAC GGTCGCGCAC GTCGATCTGG GCGCGCCGCG CAAGCCGTAC
GACGCGCCGC GCTGGCTGCC GGTGAACCGG CCGATCGCGT TCCGCGAACT CGTGAACGAT
CCGCGTCAGC TGGAGGTGCG CGGCACGACG CCCGACGCGA TCCGGCTGAA CCTGCGCGTG
CCGGCCGATC TGCATTCGTG GAACGGCGCG GGCGTGCCGA TCACGCTGCG CTACCGCTAC
ACGGCGCCGA CCGTGCAGGA CAATTCGACG CTCGCGGTCG AGATCAACGA TCAGCTCGTG
AAGTCGTACC GGCTCGGGCC GGCCCATGCC GAAGATGCGC ACGGCCGCAT GCAGCTGCCG
CTGCTGGCGG TGCCGGAAGG GCGCGTGACG AGCGACGTCG ACATTCCCGC GTTCCGCGTC
GGCAGCGGCA ACCAGCTGCA GTTCCGCTTC ACGCTCGATT CGCAGAAGAC GGGCCTGTGT
TCGAGCACGG CCACCGAGCC GCAACGCGCG GCGATCGATC CTGACTCGAC GATCGACTTC
TCGCACTTCG TCCATTACGC GCAATTGCCG AACCTCGCGT TCTTCGCGAA CAGCGGCTTC
CCGTTCACGC GCTTCGCCGA CCTGTCGCAG ACGGCCGTCG TGCTGCCCGA CCGGCCGTCG
CCGCAGGAAC TCGAGGCCTA CCTGACGATG CTCGGCCACA TGGGTGAATG GACCGGTTTC
CCGGCGCTGC GCGTGCAGGT GGCGCGGCCC GGCGACGTCG CCGCGCTGTC GGGGCACAAG
GACCTGCTCG TGATCGACGG CTCGCCCGCA TCGCCGCTGC TCGCGCAGTG GCGCGCGGCG
CTGCCGCTCG CGATCGGCGA GCAGGGCGGG GCCGGCGGCG CGGGCGCGAC GCGCGTCGCT
TTCACGGTGA AGGAGCGCTG GCGCAACGGC GTGGGCCTCG CCGACGGCGG CGCGCATATC
GAACAGACGG GCCCGCTCGC GGCGCTCGCC GGGTTCGAGC TGCCCGGTAG CCGCGGCCGC
AGCGTCGTCG CGCTGACGGC GACCGACCAG CCGCGCCTCG GCGATCTGCT CGACGTGTTC
GAGAGCGGCG GGCTCGTGTC GCAGTTGCAG GGCGACCTCG CGCTGGTCCG GCCGGGGCAG
GTCGACAGCC TGCGGGTCGG CGAGCCTTAC GTGGTCGGCT TCGTGCCGTG GTATGCGCGC
GTGTGGACGG AGGCGGCGCG GCATCCGGTG CTGCTCGGCG CGGTCGGCGT CGTCGCAGGG
CTGCTGCTCG CGCTCGGCGT GTTCAGCGTG CTGCAGCGAA TCGCCGCGCG TCGCCGGGGG
ATGTAA
|
|---|
| Protein sequence | MKPAVSLFVL AAAMTGAFHT AALSAAPLPA VPAAASTAAA DHAAVPDAAP AAVLVTAPAT
PAAASAPTAG LPATTVRMPF ASLGAFDPLR LRGADDARTI NAGVRLDRVI TGARLRLTYA
YSPSLVFPLS HLKVSVNGEV IATVPFDAAR AGRTVTQEIP IDPRYFSDFN QIGLRLIAHY
TLDHCEDPTN SALWADVSPT SELILDESPV RLPNDLALLP APFFDRRDNG RLRLPFVLPA
TPDSATLRSA GVLASWFGAL ADYRHARFPV STALPADDQA VVVGTAATLP AGLALPPING
PLLAVADNPS APGRKLLVVT GRTAAEVDDA VATLVLGRAA LSGQAATVAH VDLGAPRKPY
DAPRWLPVNR PIAFRELVND PRQLEVRGTT PDAIRLNLRV PADLHSWNGA GVPITLRYRY
TAPTVQDNST LAVEINDQLV KSYRLGPAHA EDAHGRMQLP LLAVPEGRVT SDVDIPAFRV
GSGNQLQFRF TLDSQKTGLC SSTATEPQRA AIDPDSTIDF SHFVHYAQLP NLAFFANSGF
PFTRFADLSQ TAVVLPDRPS PQELEAYLTM LGHMGEWTGF PALRVQVARP GDVAALSGHK
DLLVIDGSPA SPLLAQWRAA LPLAIGEQGG AGGAGATRVA FTVKERWRNG VGLADGGAHI
EQTGPLAALA GFELPGSRGR SVVALTATDQ PRLGDLLDVF ESGGLVSQLQ GDLALVRPGQ
VDSLRVGEPY VVGFVPWYAR VWTEAARHPV LLGAVGVVAG LLLALGVFSV LQRIAARRRG
M
|
|---|
| |